RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SLC6A14Q9UN76 642 aa24.48■■□□□ 1.51
COL13A1-203ENST00000398969 MAP4K5Q9Y4K4 846 aa24.48■■□□□ 1.51
COL13A1-203ENST00000398969 PCM1Q15154 2024 aa24.48■■□□□ 1.51
COL13A1-203ENST00000398969 SAP18O00422 153 aaKnown RBP24.47■■□□□ 1.51
COL13A1-203ENST00000398969 ZNF197O14709 1029 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 PCDH17O14917 1159 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 SRPRAP08240 638 aaKnown RBP24.47■■□□□ 1.51
COL13A1-203ENST00000398969 MAPK9P45984 424 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 LIMS1P48059 325 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 CRISP3P54108 245 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 SLBPQ14493 270 aaKnown RBP eCLIP24.47■■□□□ 1.51
COL13A1-203ENST00000398969 CRB2Q5IJ48 1285 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 TRIM40Q6P9F5 258 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 TMEM220Q6QAJ8 160 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 TECPR1Q7Z6L1 1165 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 RNF130Q86XS8 419 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.47■■□□□ 1.51
COL13A1-203ENST00000398969 OR5AK3PQ8NH89 298 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 WDR48Q8TAF3 677 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 HTRA1Q92743 480 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 CENPOQ9BU64 300 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 TRIM39Q9HCM9 518 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 DMRT3Q9NQL9 472 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 PRKAG2Q9UGJ0 569 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 FAM32AQ9Y421 112 aaKnown RBP24.47■■□□□ 1.51
COL13A1-203ENST00000398969 PRAMEF33A0A0G2JMD5 474 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 FOXE1O00358 373 aaPredicted RBP24.47■■□□□ 1.51
COL13A1-203ENST00000398969 PRAMEF10O60809 474 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 POU2F1P14859 743 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 CYP4F2P78329 520 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 SLC5A12Q1EHB4 618 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 TMEM215Q68D42 235 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 SYTL1Q8IYJ3 562 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 B3GNT7Q8NFL0 401 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 FAM129BQ96TA1 746 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 CORO1BQ9BR76 489 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 TMEM121BQ9BXQ6 578 aaPredicted RBP24.47■■□□□ 1.51
COL13A1-203ENST00000398969 IRAK3Q9Y616 596 aa24.47■■□□□ 1.51
COL13A1-203ENST00000398969 CFAP20Q9Y6A4 193 aaKnown RBP24.47■■□□□ 1.51
COL13A1-203ENST00000398969 TSPAN11A1L157 253 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 C1orf105O95561 183 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 NPPBP16860 134 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 SEPHS1P49903 392 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 C2orf80Q0P641 193 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 TMEM240Q5SV17 173 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 PNCKQ6P2M8 343 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 LAS2Q8IYD9 372 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 C16orf78Q8WTQ4 265 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 WDR34Q96EX3 536 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 CRELD1Q96HD1 420 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 IFT52Q9Y366 437 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 HCN4Q9Y3Q4 1203 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 GPC6Q9Y625 555 aaPredicted RBP24.46■■□□□ 1.51
COL13A1-203ENST00000398969 HELZP42694 1942 aaKnown RBP24.46■■□□□ 1.51
COL13A1-203ENST00000398969 HIDE1A8MVS5 230 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 KLHL18O94889 574 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 TGFB1P01137 390 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 CTSLP07711 333 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 CHI3L1P36222 383 aaPredicted RBP24.46■■□□□ 1.51
COL13A1-203ENST00000398969 OLR1P78380 273 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 ZNF45Q02386 682 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 PRKCDQ05655 676 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 TSTA3Q13630 321 aaPredicted RBP24.46■■□□□ 1.51
COL13A1-203ENST00000398969 ZNF630Q2M218 657 aaPredicted RBP24.46■■□□□ 1.51
COL13A1-203ENST00000398969 POC5Q8NA72 575 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 FAM83FQ8NEG4 500 aaPredicted RBP24.46■■□□□ 1.51
COL13A1-203ENST00000398969 GTPBP3Q969Y2 492 aaKnown RBP24.46■■□□□ 1.51
COL13A1-203ENST00000398969 CHCHD6Q9BRQ6 235 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 OR51B5Q9H339 312 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 MYNNQ9NPC7 610 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 TAS2R16Q9NYV7 291 aa24.46■■□□□ 1.51
COL13A1-203ENST00000398969 H3BM21 787 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 CBLP22681 906 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 S100A5P33763 92 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 HMGA2P52926 109 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 PTGES3Q15185 160 aaKnown RBP24.45■■□□□ 1.5
COL13A1-203ENST00000398969 PRSS53Q2L4Q9 553 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 FAM71E1Q6IPT2 247 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 DPPA4Q7L190 304 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 PARP16Q8N5Y8 322 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 LMNTD1Q8N9Z9 388 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 SP7Q8TDD2 431 aaPredicted RBP24.45■■□□□ 1.5
COL13A1-203ENST00000398969 EFCAB11Q9BUY7 163 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 TAS2R9Q9NYW1 312 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 GULP1Q9UBP9 304 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 ALPK3Q96L96 1907 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 PIPSLA2A3N6 862 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 IFNA14P01570 189 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 HSMCR30P0CW71 290 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 RPL3P39023 403 aaKnown RBP24.45■■□□□ 1.5
COL13A1-203ENST00000398969 CCR2P41597 374 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 PCBP3P57721 371 aaKnown RBP24.45■■□□□ 1.5
COL13A1-203ENST00000398969 SELENBP1Q13228 472 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 GANABQ14697 944 aaKnown RBP24.45■■□□□ 1.5
COL13A1-203ENST00000398969 IER5LQ5T953 404 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 ZNF367Q7RTV3 350 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 CYB5D2Q8WUJ1 264 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 SORCS1Q8WY21 1168 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 AP2M1Q96CW1 435 aa24.45■■□□□ 1.5
COL13A1-203ENST00000398969 DYRK1BQ9Y463 629 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms