RNA–Protein interactions for RNA: ENST00000398647.7

FAM3B-203, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM3B, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-203ENST00000398647 TREX1Q9NSU2 369 aa12.72□□□□□ -0.37
FAM3B-203ENST00000398647 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.72□□□□□ -0.37
FAM3B-203ENST00000398647 CUBNO60494 3623 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 ANK3Q12955 4377 aaKnown RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 MBD3L4A6NDZ8 208 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 MBD3L5A6NJ08 208 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 AHRRA9YTQ3 701 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 EEF1E1-BLOC1S5C9J1V9 151 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 WWP2O00308 870 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 CLDN4O14493 209 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 EEF1E1O43324 174 aaKnown RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 AVILO75366 819 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 P04436 131 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 ZNF888P0CJ79 500 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 RNH1P13489 461 aaKnown RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 ADARP55265 1226 aaKnown RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 SIX1Q15475 284 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 C17orf64Q86WR6 236 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 OTUD6BQ8N6M0 293 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 HSPBAP1Q96EW2 488 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 CCL19Q99731 98 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 ZNF703Q9H7S9 590 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 SEMA4BQ9NPR2 832 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 PNO1Q9NRX1 252 aaKnown RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 JKAMPQ9P055 326 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 EIF3LQ9Y262 564 aaKnown RBP12.71□□□□□ -0.37
FAM3B-203ENST00000398647 ATG4BQ9Y4P1 393 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 MMACHCQ9Y4U1 282 aa12.71□□□□□ -0.37
FAM3B-203ENST00000398647 SH3D21A4FU49 640 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 KDM4EB2RXH2 506 aaPredicted RBP12.7□□□□□ -0.38
FAM3B-203ENST00000398647 E5RI56 91 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 GFYI3L273 518 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 ZBTB14O43829 449 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 FPR1P21462 350 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 CETN2P41208 172 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 TPM4P67936 248 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 KRTAP1-1Q07627 177 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 TTLL9Q3SXZ7 439 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 PCID2Q5JVF3 399 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 AADACL2Q6P093 401 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 ABHD13Q7L211 337 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 PRELID2Q8N945 189 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 NEIL3Q8TAT5 605 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 SLC6A15Q9H2J7 730 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 RHBGQ9H310 441 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 ACKR4Q9NPB9 350 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 CRYL1Q9Y2S2 319 aa12.7□□□□□ -0.38
FAM3B-203ENST00000398647 CR1P17927 2039 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 E7EVH7 732 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 PFDN6O15212 129 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 MPC1LP0DKB6 136 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 CCL3P10147 92 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 CDH1P12830 882 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 PPP2R1BP30154 601 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 OPRM1P35372 400 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 CYLC1P35663 651 aaPredicted RBP12.69□□□□□ -0.38
FAM3B-203ENST00000398647 CLCN7P51798 805 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 HK2P52789 917 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 RGS1Q08116 209 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 DMTNQ08495 405 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 KIAA0930Q6ICG6 404 aaPredicted RBP12.69□□□□□ -0.38
FAM3B-203ENST00000398647 MRNIPQ6NTE8 343 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 HSDL2Q6YN16 418 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 SDCCAG8Q86SQ7 713 aaPredicted RBP12.69□□□□□ -0.38
FAM3B-203ENST00000398647 SCUBE1Q8IWY4 988 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 LIX1Q8N485 282 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 NT5CQ8TCD5 201 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 UTP15Q8TED0 518 aaKnown RBP12.69□□□□□ -0.38
FAM3B-203ENST00000398647 GSX2Q9BZM3 304 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 EPB41L4BQ9H329 900 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 ETNK1Q9HBU6 452 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 ABHD10Q9NUJ1 306 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 NPFFR2Q9Y5X5 522 aa12.69□□□□□ -0.38
FAM3B-203ENST00000398647 USF3Q68DE3 2245 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 GOLGA6L9A6NEM1 432 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 CASKO14936 926 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 OR1F1O43749 312 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 IL18BPO95998 194 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 SERPIND1P05546 499 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 RFPL3SP0C7P2 107 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 ENO3P13929 434 aaPredicted RBP12.68□□□□□ -0.38
FAM3B-203ENST00000398647 CTSSP25774 331 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 ARNTP27540 789 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 FDFT1P37268 417 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 AGFG1P52594 562 aaKnown RBP12.68□□□□□ -0.38
FAM3B-203ENST00000398647 RWDD2BP57060 319 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 CUL1Q13616 776 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 SF3B4Q15427 424 aaKnown RBP eCLIP12.68□□□□□ -0.388e-13■■■■■ 42.4
FAM3B-203ENST00000398647 ACKR1Q16570 336 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 BBS9Q3SYG4 887 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 NSUN5P2Q63ZY6 315 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 HEPHL1Q6MZM0 1159 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 OPN5Q6U736 354 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 STRA8Q7Z7C7 330 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 CA13Q8N1Q1 262 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 LRRC25Q8N386 305 aaPredicted RBP12.68□□□□□ -0.38
FAM3B-203ENST00000398647 ABHD11Q8NFV4 315 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 GIMAP7Q8NHV1 300 aa12.68□□□□□ -0.38
FAM3B-203ENST00000398647 PPP1R14CQ8TAE6 165 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms