RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 VAMP2P63027 116 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 TYSND1Q2T9J0 566 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 PRAP1Q96NZ9 151 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 SLC2A13Q96QE2 648 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 OR1F2PQ96R84 312 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 CCDC59Q9P031 241 aaKnown RBP13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 DPPA5A6NC42 116 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 OR14I1A6ND48 311 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 SOX1O00570 391 aaPredicted RBP13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 RNF13O43567 381 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 CTBP2P56545 445 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 MLF2Q15773 248 aaPredicted RBP13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 PRAMEF17Q5VTA0 474 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 METTL8Q9H825 291 aaKnown RBP13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 AGPSO00116 658 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 PDLIM1O00151 329 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 SOX14O95416 240 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 SHMT2P34897 504 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 RAB28P51157 221 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 MLLT10P55197 1068 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 TMIGD1Q6UXZ0 262 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 MSANTD1Q6ZTZ1 278 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 THUMPD1Q9NXG2 353 aaKnown RBP13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 AGR2O95994 175 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 RAB39AQ14964 217 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 USP43Q70EL4 1123 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 GEMIN6Q8WXD5 167 aaKnown RBP13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 LINC00597Q9H2U6 94 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 DNMT3BQ9UBC3 853 aaKnown RBP13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 TNFRSF10DQ9UBN6 386 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 GRHPRQ9UBQ7 328 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 PRKD3O94806 890 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 CER1O95813 267 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 OAS1P00973 400 aaKnown RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 CBSLP0DN79 551 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 CBSP35520 551 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 SUOXP51687 545 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 OR4D2P58180 307 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 SMAD4Q13485 552 aaKnown RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 DNM1P34Q6PK57 102 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 AGTRAPQ6RW13 159 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 DPY19L3Q6ZPD9 716 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 SCAMP4Q969E2 229 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 TLCD1Q96CP7 247 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 MSANTD3Q96H12 275 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 NPLQ9BXD5 320 aaPredicted RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 TTYH1Q9H313 450 aaPredicted RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 VNN3Q9NY84 501 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF224Q9NZL3 707 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 PEX16Q9Y5Y5 336 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 NPIPA2E9PIF3 369 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 NPIPA3F8WFD2 350 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 RAET1LQ5VY80 246 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 PYHIN1Q6K0P9 492 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 FRMD7Q6ZUT3 714 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 CRYGNQ8WXF5 182 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 TCEAL4Q96EI5 215 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 CMKLR1Q99788 373 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 KAT8Q9H7Z6 458 aaKnown RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 EBF2Q9HAK2 575 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 EIF3KQ9UBQ5 218 aaKnown RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 GPR89AB7ZAQ6 455 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 GPR89BP0CG08 455 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 NUDT6P53370 316 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 PAFAH1B3Q15102 231 aaKnown RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 DNAAF1Q8NEP3 725 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 OR52B2Q96RD2 323 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 ORAI3Q9BRQ5 295 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 EURLQ9NYK6 297 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 TAF1P21675 1872 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 BRWD3Q6RI45 1802 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 OR5K4A6NMS3 321 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 CBFA2T3O75081 653 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 HK1P19367 917 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 LASP1Q14847 261 aaKnown RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 CYP1B1Q16678 543 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 TMEM225Q6GV28 225 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 ZDHHC24Q6UX98 284 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 AQP11Q8NBQ7 271 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 FIBINQ8TAL6 211 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 NXPE2Q96DL1 559 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 BARD1Q99728 777 aaKnown RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 B4GALT7Q9UBV7 327 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 ZFR2Q9UPR6 939 aaKnown RBP13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 OR1A2Q9Y585 309 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 ARPC2O15144 300 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 VILLO15195 856 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 OR2B3O76000 313 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 AHSA1O95433 338 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 BMP8BP34820 402 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 GRK5P34947 590 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 ENTPD1P49961 510 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 AP1S2P56377 157 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 CDK6Q00534 326 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 OGDHQ02218 1023 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 BMP8AQ7Z5Y6 402 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 MARCH9Q86YJ5 346 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 TMEM130Q8N3G9 435 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 IGSF8Q969P0 613 aa13.72□□□□□ -0.21
PCDHA11-201ENST00000398640 C11orf98E9PRG8 122 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms