RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SLC22A14Q9Y267 594 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 CDC40O60508 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
TFF3-202ENST00000398431 MYO1DO94832 1006 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 TBX6O95947 436 aaPredicted RBP11.2□□□□□ -0.62
TFF3-202ENST00000398431 H2AFXP16104 143 aaPredicted RBP11.2□□□□□ -0.62
TFF3-202ENST00000398431 TCP1P17987 556 aaKnown RBP11.2□□□□□ -0.62
TFF3-202ENST00000398431 HNRNPFP52597 415 aaKnown RBP11.2□□□□□ -0.62
TFF3-202ENST00000398431 RBBP5Q15291 538 aaKnown RBP11.2□□□□□ -0.62
TFF3-202ENST00000398431 TOR1AIP1Q5JTV8 583 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 SPANXN3Q5MJ09 141 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 CCDC71Q8IV32 467 aaPredicted RBP11.2□□□□□ -0.62
TFF3-202ENST00000398431 DMRTC2Q8IXT2 367 aaPredicted RBP11.2□□□□□ -0.62
TFF3-202ENST00000398431 CYP4Z2PQ8N1L4 340 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 TBC1D19Q8N5T2 526 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 TMEM156Q8N614 296 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 ASB5Q8WWX0 329 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 ATL1Q8WXF7 558 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 PBKQ96KB5 322 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 AIF1LQ9BQI0 150 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 TRIM54Q9BYV2 358 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 PNO1Q9NRX1 252 aaKnown RBP11.2□□□□□ -0.62
TFF3-202ENST00000398431 IGSF5Q9NSI5 407 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.2□□□□□ -0.62
TFF3-202ENST00000398431 FBXW2Q9UKT8 454 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 MMACHCQ9Y4U1 282 aa11.2□□□□□ -0.62
TFF3-202ENST00000398431 V9GYY5 206 aaPredicted RBP11.2□□□□□ -0.62
TFF3-202ENST00000398431 ZFHX3Q15911 3703 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 PRRC2AP48634 2157 aaKnown RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 A0A0G2JN53 185 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 URADA6NGE7 173 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 PSMD12O00232 456 aaPredicted RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 CDC7O00311 574 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 ERLIN1O75477 346 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 TTC4O95801 387 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 HOXD4P09016 255 aaPredicted RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 ENO2P09104 434 aaPredicted RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 IVDP26440 423 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 MSX1P28360 303 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 CHRNB4P30926 498 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 HNRNPH1P31943 449 aaKnown RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 NUP107P57740 925 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 BTN3A2P78410 334 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 PMPCAQ10713 525 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 PDAP1Q13442 181 aaKnown RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 TERF2Q15554 542 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 WHAMMP3Q1A5X7 153 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 C18orf21Q32NC0 220 aaPredicted RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 GXYLT1Q4G148 440 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 ARHGAP11AQ6P4F7 1023 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 TRMT10BQ6PF06 316 aaKnown RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 TMPRSS11BQ86T26 416 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 ARMC2Q8NEN0 867 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 RND1Q92730 232 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 NCLNQ969V3 563 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 MS4A6EQ96DS6 147 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 CERS2Q96G23 380 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 VMP1Q96GC9 406 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 PWWP2AQ96N64 755 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 QRFPRQ96P65 431 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 WDR83Q9BRX9 315 aaKnown RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 TP63Q9H3D4 680 aaPredicted RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 KCMF1Q9P0J7 381 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 YARS2Q9Y2Z4 477 aaKnown RBP11.19□□□□□ -0.62
TFF3-202ENST00000398431 DYRK1BQ9Y463 629 aa11.19□□□□□ -0.62
TFF3-202ENST00000398431 NF1P21359 2839 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 LRIT2A6NDA9 550 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 FAM90A27PA6NNH2 459 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 CYR61O00622 381 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 DNALI1O14645 258 aaPredicted RBP11.18□□□□□ -0.62
TFF3-202ENST00000398431 ZNF354AO60765 605 aaPredicted RBP11.18□□□□□ -0.62
TFF3-202ENST00000398431 PRAMEF4O60810 478 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 OR2J2O76002 312 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 ZFAND5O76080 213 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 GLSO94925 669 aaPredicted RBP11.18□□□□□ -0.62
TFF3-202ENST00000398431 C1GALT1C1LP0DN25 315 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 GDF5P43026 501 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 SSR4P51571 173 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 HSD17B7P56937 341 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 KRTAP21-3Q3LHN1 58 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 HP1BP3Q5SSJ5 553 aaPredicted RBP11.18□□□□□ -0.62
TFF3-202ENST00000398431 TEX35Q5T0J7 233 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 PRAMEF9Q5VWM5 478 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 SLCO4C1Q6ZQN7 724 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 VN1R5Q7Z5H4 357 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 CREG2Q8IUH2 290 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 GPATCH11Q8N954 259 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 PSD4Q8NDX1 1056 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 ACTRT1Q8TDG2 376 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 NRGNQ92686 78 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 SEC16BQ96JE7 1060 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 NPLQ9BXD5 320 aaPredicted RBP11.18□□□□□ -0.62
TFF3-202ENST00000398431 ZDHHC11Q9H8X9 412 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 KCNJ16Q9NPI9 418 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 TIMMDC1Q9NPL8 285 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 PRTFDC1Q9NRG1 225 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 PNPLA3Q9NST1 481 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 SAR1BQ9Y6B6 198 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 KCNE2Q9Y6J6 123 aa11.18□□□□□ -0.62
TFF3-202ENST00000398431 A0A0G2JMM0 328 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms