RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 HMX2A2RU54 273 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 NPIPA7E9PJI5 369 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 B4GALT5O43286 388 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 SCN2BO60939 215 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 SCGB1D1O95968 90 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 TRBC1P01850 177 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 NPIPA8P0DM63 369 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 PSMB6P28072 239 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 IGFALSP35858 605 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC1A2P43004 574 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ALDH9A1P49189 494 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 DLG1Q12959 904 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 PMS2P11Q13670 270 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 TBCEQ15813 527 aaPredicted RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 INTS6LQ5JSJ4 861 aaKnown RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 LDLRAP1Q5SW96 308 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 WSCD1Q658N2 575 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 KIAA1324Q6UXG2 1013 aaKnown RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 LUZP2Q86TE4 346 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 KLBQ86Z14 1044 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 PLD3Q8IV08 490 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 CCDC71Q8IV32 467 aaPredicted RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 C17orf47Q8NEP4 570 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 WFIKKN2Q8TEU8 576 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 PHYHIPQ92561 330 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 KTI12Q96EK9 354 aaPredicted RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF385AQ96PM9 386 aaKnown RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 MMP19Q99542 508 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 MAPKAP1Q9BPZ7 522 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 C2orf88Q9BSF0 95 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 MRPS26Q9BYN8 205 aaKnown RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ING3Q9NXR8 418 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 KLHL8Q9P2G9 620 aaPredicted RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 NAGKQ9UJ70 344 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 COPG1Q9Y678 874 aaKnown RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 SIP14410 1827 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 IGKV6-21A0A0C4DH24 114 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 A0A1W2PPQ1 181 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 TOP3BO95985 862 aaKnown RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 NQO2P16083 231 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 CAPZBP47756 277 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ARSFP54793 590 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 EPS8Q12929 822 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 TUBB3Q13509 450 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ADGRE1Q14246 886 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 PLAC9Q5JTB6 97 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 FAM83HQ6ZRV2 1179 aaPredicted RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 FRMD7Q6ZUT3 714 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF534Q76KX8 674 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 MARVELD2Q8N4S9 558 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 OR5T2Q8NGG2 359 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 KAT2AQ92830 837 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ATOH1Q92858 354 aaPredicted RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 RASD2Q96D21 266 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 DCUN1D1Q96GG9 259 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 SPATA33Q96N06 139 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 PRDM13Q9H4Q3 707 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 PDZD7Q9H5P4 517 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 DDX31Q9H8H2 851 aaKnown RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 EFCAB1Q9HAE3 211 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ABCB10Q9NRK6 738 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 TMEM160Q9NX00 188 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 GLTPQ9NZD2 209 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 TMEM216Q9P0N5 145 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 GLS2Q9UI32 602 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 TCFL5Q9UL49 500 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 SCML1Q9UN30 329 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 TESMINQ9Y4I5 508 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 NUBP2Q9Y5Y2 271 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 DRGXA6NNA5 263 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 FAM227AF5H4B4 570 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 H7C4K7 107 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 CFLARO15519 480 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ASNA1O43681 348 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 DFNA5O60443 496 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 F10P00742 488 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 IFNA2P01563 188 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 YES1P07947 543 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 BPIP17213 487 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 MC5RP33032 325 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 GRIA1P42261 906 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 GIPRP48546 466 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 CLCN3P51790 818 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 CRADDP78560 199 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 SPIBQ01892 262 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF91Q05481 1191 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 MBTD1Q05BQ5 628 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 GAB4Q2WGN9 574 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC36A3Q495N2 470 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 RNFT1Q5M7Z0 435 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 OGFRL1Q5TC84 451 aaPredicted RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ARHGAP40Q5TG30 622 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 FAM111BQ6SJ93 734 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 EPGNQ6UW88 154 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 PID1Q7Z2X4 250 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 ACOT1Q86TX2 421 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 APOBEC3FQ8IUX4 373 aaKnown RBP6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 SIX6OS1Q8N1H7 587 aa6.33□□□□□ -1.4
TM9SF4-202ENST00000398022 CLIP4Q8N3C7 705 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms