RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 EBPLQ9BY08 206 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 ASCL3Q9NQ33 180 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 SIRT5Q9NXA8 310 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 POLR3HQ9Y535 204 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 A0A0A6YYD5 115 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 TEX51A0A1B0GUA7 166 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 BRINP1O60477 761 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 SHOX2O60902 331 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 DXOO77932 396 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 SCELO95171 688 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 DLGAP3O95886 979 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 PRR35P0CG20 571 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 LBPP18428 481 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 AGXTP21549 392 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 FBLP22087 321 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 TPP2P29144 1249 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 DCDP81605 110 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 SLAMF1Q13291 335 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 RUNX2Q13950 521 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 ARHGAP40Q5TG30 622 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 ZNF385CQ66K41 422 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 NOXRED1Q6NXP6 359 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 C6orf15Q6UXA7 325 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 ZCCHC7Q8N3Z6 543 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 OR5T3Q8NGG3 340 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 ACTRT2Q8TDY3 377 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 OR52B2Q96RD2 323 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 NPLQ9BXD5 320 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 SPRY4Q9C004 299 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 EPN3Q9H201 632 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 RABEP2Q9H5N1 569 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 KCNK13Q9HB14 408 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 HCN3Q9P1Z3 774 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 MCM8Q9UJA3 840 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 TMED5Q9Y3A6 229 aa22.34■■□□□ 1.17
TSPAN4-203ENST00000397397 DNAJB6O75190 326 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 MAT1AQ00266 395 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 SLC9A5Q14940 896 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 SMU1Q2TAY7 513 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 NKAIN1Q4KMZ8 207 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 GALNT18Q6P9A2 607 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 CA13Q8N1Q1 262 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 CEP70Q8NHQ1 597 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 MR1Q95460 341 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 C11orf24Q96F05 449 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 ELAC2Q9BQ52 826 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 C1orf50Q9BV19 199 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 YIPF2Q9BWQ6 316 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 TMEM120AQ9BXJ8 343 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 TMEM121BQ9BXQ6 578 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 TCF7L2Q9NQB0 619 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 THSD1Q9NS62 852 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 KLHL14Q9P2G3 628 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 MSRB2Q9Y3D2 182 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 FER1L5A0AVI2 2057 aa22.33■■□□□ 1.17
TSPAN4-203ENST00000397397 SDK2Q58EX2 2172 aa22.33■■□□□ 1.16
TSPAN4-203ENST00000397397 GNG14A0A1W2PPG7 69 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 CHST10O43529 356 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 TMPRSS11DO60235 418 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 ANXA4P09525 319 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 PIM1P11309 404 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 CD82P27701 267 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 MAPK1P28482 360 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 MAPK12P53778 367 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 ERVK-8P63133 956 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 EMX2Q04743 252 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 MAD2L1Q13257 205 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 DSG2Q14126 1118 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 SYT16Q17RD7 645 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 LSM12Q3MHD2 195 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 TIPARPQ7Z3E1 657 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 FCRL1Q96LA6 429 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 DPH2Q9BQC3 489 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 CCDC28BQ9BUN5 200 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 CLK4Q9HAZ1 481 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 LYARQ9NX58 379 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 FBXW2Q9UKT8 454 aa22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 EIF3LQ9Y262 564 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-203ENST00000397397 SRRM3A6NNA2 597 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 C1QTNF9BB2RNN3 333 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 FAM58BPP0C7Q3 252 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 CCNYL3P0C7X3 344 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 C1QTNF9P0C862 333 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 ARFIP2P53365 341 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 LIM2P55344 173 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 IL23RQ5VWK5 629 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 MRM1Q6IN84 353 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 RILPQ96NA2 401 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 MAPKAP1Q9BPZ7 522 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 AKIRIN1Q9H9L7 192 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 LYRM4Q9HD34 91 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 SLC22A11Q9NSA0 550 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 IFT80Q9P2H3 777 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 TRPC4Q9UBN4 977 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 PADI1Q9ULC6 663 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 DLGAP4Q9Y2H0 992 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 STMND1H3BQB6 276 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 MAP7Q14244 749 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 LCN10Q6JVE6 187 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 OGFOD2Q6N063 350 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms