RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 APIPQ96GX9 242 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 PPM1MQ96MI6 270 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 PRAP1Q96NZ9 151 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 GFM1Q96RP9 751 aaKnown RBP14.22□□□□□ -0.13
CAPN3-207ENST00000397200 DPYSL5Q9BPU6 564 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 NUDT22Q9BRQ3 303 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 DPH7Q9BTV6 452 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 EFCAB11Q9BUY7 163 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 EHD1Q9H4M9 534 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 Q9H521 79 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 SLC6A20Q9NP91 592 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 SERHLQ9NQF3 203 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 AGPAT4Q9NRZ5 378 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 TMEM184CQ9NVA4 438 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 SLC25A37Q9NYZ2 338 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 KLHL3Q9UH77 587 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 ATXN7L1Q9ULK2 861 aaPredicted RBP14.22□□□□□ -0.13
CAPN3-207ENST00000397200 SNX7Q9UNH6 387 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 MN1Q10571 1320 aaPredicted RBP14.22□□□□□ -0.13
CAPN3-207ENST00000397200 ZNF292O60281 2723 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 TLCD2A6NGC4 264 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 CASC3O15234 703 aaKnown RBP14.21□□□□□ -0.13
CAPN3-207ENST00000397200 ERN1O75460 977 aaKnown RBP14.21□□□□□ -0.13
CAPN3-207ENST00000397200 TIPRLO75663 272 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 C9P02748 559 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 FCGR1AP12314 374 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 MAGP20916 626 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 LSSP48449 732 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 OR4D2P58180 307 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 PHC1P78364 1004 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 CFHR1Q03591 330 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 LAPTM5Q13571 262 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 CLPPQ16740 277 aaPredicted RBP14.21□□□□□ -0.13
CAPN3-207ENST00000397200 TBCELQ5QJ74 424 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 C10orf62Q5T681 223 aaPredicted RBP14.21□□□□□ -0.13
CAPN3-207ENST00000397200 UGT2A3Q6UWM9 527 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 PACRGLQ8N7B6 248 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 TRPV3Q8NET8 790 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 OR52E4Q8NGH9 312 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 FAM110BQ8TC76 370 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 EME1Q96AY2 570 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 MAP3K3Q99759 626 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 AIF1LQ9BQI0 150 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 PAIP1Q9H074 479 aaKnown RBP14.21□□□□□ -0.13
CAPN3-207ENST00000397200 SEMA6CQ9H3T2 930 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 RPF2Q9H7B2 306 aaKnown RBP14.21□□□□□ -0.13
CAPN3-207ENST00000397200 C1GALT1Q9NS00 363 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 ANKMY1Q9P2S6 941 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 PPT2Q9UMR5 302 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 KLHL20Q9Y2M5 609 aa14.21□□□□□ -0.13
CAPN3-207ENST00000397200 FAM186AA6NE01 2351 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 A0A096LPI6 279 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 IGKV1-8A0A0C4DH67 115 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 VGLL3A8MV65 326 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 RFPL3O75679 317 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 UBTFL6P0CB48 400 aaPredicted RBP14.2□□□□□ -0.14
CAPN3-207ENST00000397200 PVRP15151 417 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 GGT1P19440 569 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 IL10P22301 178 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 CXCR2P25025 360 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 TACR1P25103 407 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 PTPN6P29350 595 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 GRK3P35626 688 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 MTPNP58546 118 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 ILKQ13418 452 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 SLBPQ14493 270 aaKnown RBP eCLIP14.2□□□□□ -0.14
CAPN3-207ENST00000397200 PDK3Q15120 406 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 TRIP6Q15654 476 aaKnown RBP14.2□□□□□ -0.14
CAPN3-207ENST00000397200 HIST2H2ACQ16777 129 aaPredicted RBP14.2□□□□□ -0.14
CAPN3-207ENST00000397200 DPY19L1Q2PZI1 675 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 CCDC157Q569K6 752 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 RUNDC3AQ59EK9 446 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 PAGE2BQ5JRK9 111 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 SNAP47Q5SQN1 464 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 INTS11Q5TA45 600 aaKnown RBP14.2□□□□□ -0.14
CAPN3-207ENST00000397200 HIST2H2AA3Q6FI13 130 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 PPP4R4Q6NUP7 873 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 NOXRED1Q6NXP6 359 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 TMEM71Q6P5X7 295 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 FIGLAQ6QHK4 219 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 CARFQ8N187 725 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 KRT78Q8N1N4 520 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 DEFB124Q8NES8 71 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 WDR48Q8TAF3 677 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 ZNF583Q96ND8 569 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 CPPED1Q9BRF8 314 aaPredicted RBP14.2□□□□□ -0.14
CAPN3-207ENST00000397200 KLHL25Q9H0H3 589 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 GEMIN8Q9NWZ8 242 aaKnown RBP14.2□□□□□ -0.14
CAPN3-207ENST00000397200 TMEM9Q9P0T7 183 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 USP22Q9UPT9 525 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 AP4B1Q9Y6B7 739 aa14.2□□□□□ -0.14
CAPN3-207ENST00000397200 DPPA5A6NC42 116 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 EIF4E1BA6NMX2 242 aaKnown RBP14.19□□□□□ -0.14
CAPN3-207ENST00000397200 NTN3O00634 580 aaPredicted RBP14.19□□□□□ -0.14
CAPN3-207ENST00000397200 KIF1CO43896 1103 aaKnown RBP14.19□□□□□ -0.14
CAPN3-207ENST00000397200 HOXB3P14651 431 aaPredicted RBP14.19□□□□□ -0.14
CAPN3-207ENST00000397200 ST6GAL1P15907 406 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 CSNK1G2P78368 415 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 REEP5Q00765 189 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 MEF2AQ02078 507 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms