RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 SPRP35270 261 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 CA7P43166 264 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 GPR143P51810 404 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 ETF1P62495 437 aaKnown RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 GUCY2DQ02846 1103 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 EFTUD2Q15029 972 aaKnown RBP eCLIP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 MAPKAPK3Q16644 382 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 SP5Q6BEB4 398 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 ABHD17CQ6PCB6 329 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 UBE3DQ7Z6J8 389 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 ISCA2Q86U28 154 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 SIAH3Q8IW03 269 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 ARMC10Q8N2F6 343 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 TMEM178AQ8NBL3 297 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 PDPRQ8NCN5 879 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 ARMC2Q8NEN0 867 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 FBF1Q8TES7 1133 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 THAP3Q8WTV1 239 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 ITLN2Q8WWU7 325 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 EXT2Q93063 718 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 CCDC120Q96HB5 630 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 NPLQ9BXD5 320 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 DEFB126Q9BYW3 111 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 CD244Q9BZW8 370 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 PITHD1Q9GZP4 211 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 REXO4Q9GZR2 422 aaKnown RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 ALG9Q9H6U8 611 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 TRIM45Q9H8W5 580 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 CNOT10Q9H9A5 744 aaKnown RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 PRDM7Q9NQW5 492 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 PRTFDC1Q9NRG1 225 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 SH3BGRL2Q9UJC5 107 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 ZNF223Q9UK11 482 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 RNF112Q9ULX5 631 aa17.6■□□□□ 0.41
MCF2L-207ENST00000397024 UTP11Q9Y3A2 253 aaKnown RBP17.6■□□□□ 0.41
MCF2L-207ENST00000397024 TRBV11-1A0A0K0K1C0 115 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 NPIPA5E9PKD4 350 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 CYR61O00622 381 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 CCNT2O60583 730 aaKnown RBP17.59■□□□□ 0.41
MCF2L-207ENST00000397024 SLC19A2O60779 497 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 SLC25A12O75746 678 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 SLC35E2BP0CK96 405 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 CERS1P27544 350 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 TRHRP34981 398 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-207ENST00000397024 RAB38P57729 211 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 ALDH6A1Q02252 535 aaKnown RBP17.59■□□□□ 0.41
MCF2L-207ENST00000397024 C3AR1Q16581 482 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 PDK4Q16654 411 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 FAM47BQ8NA70 645 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 B3GNT7Q8NFL0 401 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 PTCD3Q96EY7 689 aaKnown RBP17.59■□□□□ 0.41
MCF2L-207ENST00000397024 SEC16BQ96JE7 1060 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 GPR137Q96N19 417 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 IGSF5Q9NSI5 407 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 NPIPA1Q9UND3 350 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 ZNF835Q9Y2P0 537 aa17.59■□□□□ 0.41
MCF2L-207ENST00000397024 DCHS2Q6V1P9 2916 aa17.58■□□□□ 0.41
MCF2L-207ENST00000397024 CSMD1Q96PZ7 3565 aa17.58■□□□□ 0.41
MCF2L-207ENST00000397024 B3GALT2O43825 422 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 PRKNO60260 465 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-207ENST00000397024 NME2P1O60361 137 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 TFEBP19484 476 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 NME2P22392 152 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 GSTM2P28161 218 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 GRNP28799 593 aaKnown RBP17.58■□□□□ 0.4
MCF2L-207ENST00000397024 CYB561P49447 251 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 HLCSP50747 726 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 LIM2P55344 173 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 HSD17B7P56937 341 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 SLC7A5Q01650 507 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 CAV1Q03135 178 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 CHIT1Q13231 466 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 C16orf47Q6ZP98 133 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-207ENST00000397024 CLNKQ7Z7G1 428 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 CHERPQ8IWX8 916 aaKnown RBP17.58■□□□□ 0.4
MCF2L-207ENST00000397024 HORMAD2Q8N7B1 307 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 SERINC2Q96SA4 455 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 ATOH8Q96SQ7 321 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 CSF3RQ99062 836 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 EFCAB11Q9BUY7 163 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 PHACTR1Q9C0D0 580 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 KCMF1Q9P0J7 381 aa17.58■□□□□ 0.4
MCF2L-207ENST00000397024 PPIEQ9UNP9 301 aaKnown RBP17.58■□□□□ 0.4
MCF2L-207ENST00000397024 FBN2P35556 2912 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 UBXN8O00124 270 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 ASNA1O43681 348 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 PRF1P14222 555 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 CASP2P42575 452 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 MTTPP55157 894 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 IRF8Q02556 426 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 RBPJQ06330 500 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 SLC13A2Q13183 592 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 E2F2Q14209 437 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 SLMAPQ14BN4 828 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.57■□□□□ 0.4
MCF2L-207ENST00000397024 KRTCAP3Q53RY4 240 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 TRIM40Q6P9F5 258 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 ZNF793Q6ZN11 406 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 RAPH1Q70E73 1250 aa17.57■□□□□ 0.4
MCF2L-207ENST00000397024 ZNF572Q7Z3I7 529 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms