RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 BCL7CQ8WUZ0 217 aaPredicted RBP23■■□□□ 1.27
CSNK1E-203ENST00000396832 DIABLOQ9NR28 239 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 ACSL6Q9UKU0 697 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 FAM227AF5H4B4 570 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 RPS3P23396 243 aaKnown RBP eCLIP23■■□□□ 1.27
CSNK1E-203ENST00000396832 CRATP43155 626 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 CCL23P55773 120 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 ABRQ12979 859 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 TSTA3Q13630 321 aaPredicted RBP23■■□□□ 1.27
CSNK1E-203ENST00000396832 LARS2Q15031 903 aaKnown RBP23■■□□□ 1.27
CSNK1E-203ENST00000396832 EXOC3L2Q2M3D2 409 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 GLRX5Q86SX6 157 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 AMIGO1Q86WK6 493 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 NAGSQ8N159 534 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 ASIC4Q96FT7 647 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 CMTM7Q96FZ5 175 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 HHIPQ96QV1 700 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 CNOT2Q9NZN8 540 aaKnown RBP23■■□□□ 1.27
CSNK1E-203ENST00000396832 SH3BP4Q9P0V3 963 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 CLEC4EQ9ULY5 219 aa23■■□□□ 1.27
CSNK1E-203ENST00000396832 KCNE1BA0A087WTH5 132 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 CDK2AP1O14519 115 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 PLA2G10O15496 165 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 CD22P20273 847 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 PSMA1P25786 263 aaKnown RBP22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 AOAHP28039 575 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 CRYBB2P43320 205 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 TATDN3Q17R31 274 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 MICAQ29983 383 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 MSANTD1Q6ZTZ1 278 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 ZNF767PQ75MW2 155 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 NLGN4YQ8NFZ3 816 aaPredicted RBP22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 OR4K1Q8NGD4 311 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 UBTD2Q8WUN7 234 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 MED8Q96G25 268 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 DIRAS2Q96HU8 199 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 C5orf42Q9H799 3197 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 TET1Q8NFU7 2136 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 WWP2O00308 870 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 SHOXO15266 292 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 HIST1H2AGP0C0S8 130 aaPredicted RBP22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 HIST1H2ADP20671 130 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 POU1F1P28069 291 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 CDC42P60953 191 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 MTAPQ13126 283 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 PTGES3Q15185 160 aaKnown RBP22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 GPR19Q15760 415 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 COX20Q5RI15 118 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 TIGD3Q6B0B8 471 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 FAM181AQ8N9Y4 354 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 HIST1H2AHQ96KK5 128 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 HIST1H2AJQ99878 128 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 H2AFJQ9BTM1 129 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.99■■□□□ 1.272e-6■■■■□ 25.6
CSNK1E-203ENST00000396832 RERGLQ9H628 205 aa22.99■■□□□ 1.27
CSNK1E-203ENST00000396832 LEUTXA8MZ59 168 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 TMEM189-UBE2V1I3L0A0 370 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 SCN2BO60939 215 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 ADAMTS4O75173 837 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 CCNB2O95067 398 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 ETHE1O95571 254 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 CPN2P22792 545 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 MAPK1P28482 360 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 SSTR4P31391 388 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 SPAM1P38567 509 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 AP2S1P53680 142 aaPredicted RBP22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 SMAD3P84022 425 aaKnown RBP22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 PTCHD4Q6ZW05 846 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 GPR155Q7Z3F1 870 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 LSMEM1Q8N8F7 131 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 MIXL1Q9H2W2 232 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 NIPAL2Q9H841 368 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 ZNF556Q9HAH1 456 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 IQCMA0A1B0GVH7 501 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 ZNF670-ZNF695F2Z2N8 137 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 ARHGEF15O94989 841 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 C1QBP02746 253 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 HLA-EP13747 358 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 ALAS2P22557 587 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 GPC1P35052 558 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 STK19P49842 368 aaPredicted RBP22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 TRIM71Q2Q1W2 868 aaKnown RBP22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 PYDC2Q56P42 97 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 PLET1Q6UQ28 207 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 TPGS1Q6ZTW0 290 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 FBXO22Q8NEZ5 403 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 OR4C15Q8NGM1 316 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 OR5AK3PQ8NH89 298 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 CHTF18Q8WVB6 975 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 HTATIP2Q9BUP3 242 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 CLN6Q9NWW5 311 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 CLEC2DQ9UHP7 191 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 HSPB11Q9Y547 144 aa22.98■■□□□ 1.27
CSNK1E-203ENST00000396832 A0A1W2PQL4 384 aaPredicted RBP22.97■■□□□ 1.27
CSNK1E-203ENST00000396832 TSPAN19P0C672 248 aa22.97■■□□□ 1.27
CSNK1E-203ENST00000396832 ETFAP13804 333 aa22.97■■□□□ 1.27
CSNK1E-203ENST00000396832 IRF8Q02556 426 aa22.97■■□□□ 1.27
CSNK1E-203ENST00000396832 XKR6Q5GH73 641 aa22.97■■□□□ 1.27
CSNK1E-203ENST00000396832 SDE2Q6IQ49 451 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms