RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 HTR6P50406 440 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 ARFIP1P53367 373 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 ZNF33BQ06732 778 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 CDC20Q12834 499 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 RUNX2Q13950 521 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 SSPNQ14714 243 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 UGT8Q16880 541 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 SHISA5Q8N114 240 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 CA13Q8N1Q1 262 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 CRELD1Q96HD1 420 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 HBEGFQ99075 208 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 SORBS1Q9BX66 1292 aaKnown RBP18.14■□□□□ 0.49
HOXA9-202ENST00000396345 NMRK1Q9NWW6 199 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 SLC12A4Q9UP95 1085 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 AZIN1O14977 448 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 JRKO75564 520 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 RNH1P13489 461 aaKnown RBP18.13■□□□□ 0.49
HOXA9-202ENST00000396345 HSD3B1P14060 373 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 BGNP21810 368 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 HIST1H1TP22492 207 aaPredicted RBP18.13■□□□□ 0.49
HOXA9-202ENST00000396345 HSD3B2P26439 372 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 SERPINB3P29508 390 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 OTX2P32243 289 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 TSFMP43897 325 aaKnown RBP18.13■□□□□ 0.49
HOXA9-202ENST00000396345 CSTF3Q12996 717 aaKnown RBP18.13■□□□□ 0.49
HOXA9-202ENST00000396345 ABRAXAS2Q15018 415 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 COL28A1Q2UY09 1125 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 ATP1A1-AS1Q5TC04 95 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 MFSD4BQ5TF39 518 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 CLEC6AQ6EIG7 209 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 ZNF793Q6ZN11 406 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 LAPTM4BQ86VI4 370 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 RAB43Q86YS6 212 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 ACOT4Q8N9L9 421 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 SNRNP27Q8WVK2 155 aaKnown RBP18.13■□□□□ 0.49
HOXA9-202ENST00000396345 OR1F2PQ96R84 312 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 CRB3Q9BUF7 120 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 PRORYQ9H606 182 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 AHSPQ9NZD4 102 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 C3orf18Q9UK00 162 aa18.13■□□□□ 0.49
HOXA9-202ENST00000396345 TMEM114B3SHH9 223 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 PSMD12O00232 456 aaPredicted RBP18.12■□□□□ 0.49
HOXA9-202ENST00000396345 SCELO95171 688 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 HSPA4LO95757 839 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 IGHEP01854 428 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 HEXBP07686 556 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 FHP07954 510 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 FURINP09958 794 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 GRK2P25098 689 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 ARRB2P32121 409 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 EMP2P54851 167 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 CES4AQ5XG92 561 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 SCIMPQ6UWF3 145 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 GBP7Q8N8V2 638 aaPredicted RBP18.12■□□□□ 0.49
HOXA9-202ENST00000396345 ADAMTS17Q8TE56 1095 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 TBC1D20Q96BZ9 403 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 RBCK1Q9BYM8 510 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 SEMA3GQ9NS98 782 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 VPS29Q9UBQ0 182 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 MKL2Q9ULH7 1088 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 FIS1Q9Y3D6 152 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 TRAF6Q9Y4K3 522 aa18.12■□□□□ 0.49
HOXA9-202ENST00000396345 SERTM1A2A2V5 107 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 IDSB3KWA1 339 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 ITM2AO43736 263 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 FGF4P08620 206 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 BSGP35613 385 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 LIM2P55344 173 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 RAB38P57729 211 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 ABCE1P61221 599 aaKnown RBP18.11■□□□□ 0.49
HOXA9-202ENST00000396345 STX3Q13277 289 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 TUBB8Q3ZCM7 444 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 MINDY4Q4G0A6 757 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 SH2D4BQ5SQS7 431 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 KANK2Q63ZY3 851 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 ATG14Q6ZNE5 492 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 GPR155Q7Z3F1 870 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 NUDT13Q86X67 352 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 HOMEZQ8IX15 550 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 CLYBLQ8N0X4 340 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 METTL4Q8N3J2 472 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 ZNF717Q9BY31 904 aaPredicted RBP18.11■□□□□ 0.49
HOXA9-202ENST00000396345 MRPL1Q9BYD6 325 aaKnown RBP18.11■□□□□ 0.49
HOXA9-202ENST00000396345 ACPTQ9BZG2 426 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 LYRM4Q9HD34 91 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 LANCL2Q9NS86 450 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 RALYQ9UKM9 306 aaKnown RBP18.11■□□□□ 0.49
HOXA9-202ENST00000396345 DAPP1Q9UN19 280 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 POLHQ9Y253 713 aa18.11■□□□□ 0.49
HOXA9-202ENST00000396345 ITPR1Q14643 2758 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 SCN2AQ99250 2005 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 NUP210LQ5VU65 1888 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 FAM227AF5H4B4 570 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 B4GALT2O60909 372 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 EEDO75530 441 aaKnown RBP18.1■□□□□ 0.49
HOXA9-202ENST00000396345 LYPLA1O75608 230 aaPredicted RBP18.1■□□□□ 0.49
HOXA9-202ENST00000396345 CDC123O75794 336 aaPredicted RBP18.1■□□□□ 0.49
HOXA9-202ENST00000396345 CHEK2O96017 543 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 CHN1P15882 459 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 JAK1P23458 1154 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms