RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLC35A2P78381 396 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 NFATC3Q12968 1075 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 MAD2L1BPQ15013 274 aaPredicted RBP16.02■□□□□ 0.16
NUP50-202ENST00000396096 FGD3Q5JSP0 725 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 C9orf50Q5SZB4 431 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 KIAA1161Q6NSJ0 714 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 HDDC3Q8N4P3 179 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 SPPL2AQ8TCT8 520 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 OR5P2Q8WZ92 322 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 FKBP10Q96AY3 582 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 ZNF300Q96RE9 604 aaPredicted RBP16.02■□□□□ 0.16
NUP50-202ENST00000396096 RUBCNLQ9H714 662 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 PHPT1Q9NRX4 125 aaPredicted RBP16.02■□□□□ 0.16
NUP50-202ENST00000396096 SERGEFQ9UGK8 458 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 ZFR2Q9UPR6 939 aaKnown RBP16.02■□□□□ 0.16
NUP50-202ENST00000396096 ANGPT4Q9Y264 503 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 CFAP20Q9Y6A4 193 aaKnown RBP16.02■□□□□ 0.16
NUP50-202ENST00000396096 PLXND1Q9Y4D7 1925 aa16.02■□□□□ 0.16
NUP50-202ENST00000396096 ITGA2P17301 1181 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 FRKP42685 505 aaPredicted RBP16.01■□□□□ 0.15
NUP50-202ENST00000396096 IL1RL1Q01638 556 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 PIGFQ07326 219 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 FGL2Q14314 439 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 SAXO2Q658L1 398 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 LAIR1Q6GTX8 287 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 TMEM184AQ6ZMB5 413 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 MMP21Q8N119 569 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 RAB42Q8N4Z0 105 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 OR5AK3PQ8NH89 298 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 GIPC3Q8TF64 312 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 FAM131CQ96AQ9 280 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 NEURL3Q96EH8 262 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 HRASLS5Q96KN8 279 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 F2RL3Q96RI0 385 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 NRTNQ99748 197 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 C1QTNF2Q9BXJ5 285 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 NLNQ9BYT8 704 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 CXorf36Q9H7Y0 433 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 RMI1Q9H9A7 625 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 SCN3BQ9NY72 215 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 PSME2Q9UL46 239 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 MAP4K5Q9Y4K4 846 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 PRR19A6NJB7 356 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 PTGES3LE9PB15 166 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 TMX2-CTNND1H3BSU7 103 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 TNFRSF11BO00300 401 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 XPNPEP2O43895 674 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 KCNJ13O60928 360 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 OPN1SWP03999 348 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 SOAT1P35610 550 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 WASP42768 502 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 DSTNP60981 165 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 RPP38P78345 283 aaKnown RBP16.01■□□□□ 0.15
NUP50-202ENST00000396096 HEPACAMQ14CZ8 416 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 ITPRIPL2Q3MIP1 535 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 ZNF776Q68DI1 518 aaPredicted RBP16.01■□□□□ 0.15
NUP50-202ENST00000396096 ARMC8Q8IUR7 673 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 LINC01555Q8NAE3 123 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 FAR1Q8WVX9 515 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 GEMIN6Q8WXD5 167 aaKnown RBP16.01■□□□□ 0.15
NUP50-202ENST00000396096 ELSPBP1Q96BH3 223 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 INSM2Q96T92 566 aaPredicted RBP16.01■□□□□ 0.15
NUP50-202ENST00000396096 PSD2Q9BQI7 771 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 PLGRKTQ9HBL7 147 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 CCNB1IP1Q9NPC3 277 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 LHX9Q9NQ69 397 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 WDR37Q9Y2I8 494 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 OR1A2Q9Y585 309 aa16.01■□□□□ 0.15
NUP50-202ENST00000396096 A0A1W2PP55 124 aa16■□□□□ 0.15
NUP50-202ENST00000396096 PRAMEF25A6NGN4 478 aa16■□□□□ 0.15
NUP50-202ENST00000396096 ZNF99A8MXY4 864 aaPredicted RBP16■□□□□ 0.15
NUP50-202ENST00000396096 H7BY64 318 aa16■□□□□ 0.15
NUP50-202ENST00000396096 FUCA1P04066 466 aa16■□□□□ 0.15
NUP50-202ENST00000396096 ACVR2AP27037 513 aa16■□□□□ 0.15
NUP50-202ENST00000396096 PSMB5P28074 263 aa16■□□□□ 0.15
NUP50-202ENST00000396096 EPHA2P29317 976 aa16■□□□□ 0.15
NUP50-202ENST00000396096 FMO3P31513 532 aa16■□□□□ 0.15
NUP50-202ENST00000396096 TNFRSF4P43489 277 aa16■□□□□ 0.15
NUP50-202ENST00000396096 CASP9P55211 416 aa16■□□□□ 0.15
NUP50-202ENST00000396096 GP2P55259 537 aaKnown RBP16■□□□□ 0.15
NUP50-202ENST00000396096 PCBP4P57723 403 aaKnown RBP16■□□□□ 0.15
NUP50-202ENST00000396096 TRA2BP62995 288 aaKnown RBP16■□□□□ 0.15
NUP50-202ENST00000396096 CSNK2BP67870 215 aa16■□□□□ 0.15
NUP50-202ENST00000396096 CYP4F2P78329 520 aa16■□□□□ 0.15
NUP50-202ENST00000396096 EMX1Q04741 257 aaPredicted RBP16■□□□□ 0.15
NUP50-202ENST00000396096 MLF2Q15773 248 aaPredicted RBP16■□□□□ 0.15
NUP50-202ENST00000396096 PROX2Q3B8N5 592 aa16■□□□□ 0.15
NUP50-202ENST00000396096 DUS1LQ6P1R4 473 aaKnown RBP16■□□□□ 0.15
NUP50-202ENST00000396096 SYCE2Q6PIF2 218 aa16■□□□□ 0.15
NUP50-202ENST00000396096 NUDT13Q86X67 352 aa16■□□□□ 0.15
NUP50-202ENST00000396096 CCDC71Q8IV32 467 aaPredicted RBP16■□□□□ 0.15
NUP50-202ENST00000396096 CROCCP3Q8IVE0 287 aa16■□□□□ 0.15
NUP50-202ENST00000396096 ZNF513Q8N8E2 541 aaPredicted RBP16■□□□□ 0.15
NUP50-202ENST00000396096 RGMAQ96B86 450 aa16■□□□□ 0.15
NUP50-202ENST00000396096 THAP11Q96EK4 314 aa16■□□□□ 0.15
NUP50-202ENST00000396096 PDXPQ96GD0 296 aa16■□□□□ 0.15
NUP50-202ENST00000396096 PRAP1Q96NZ9 151 aa16■□□□□ 0.15
NUP50-202ENST00000396096 MYADMQ96S97 322 aa16■□□□□ 0.15
NUP50-202ENST00000396096 BCL7BQ9BQE9 202 aa16■□□□□ 0.15
NUP50-202ENST00000396096 A4GALTQ9NPC4 353 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms