RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SLC2A2P11168 524 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF18P17022 549 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 MARCKSP29966 332 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 PRDX6P30041 224 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC1A3P43003 542 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCL11P51671 97 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 DLX5P56178 289 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 KCNK10P57789 538 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 CSNK2BP67870 215 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 GABPAQ06546 454 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 CNTN1Q12860 1018 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 PTPN14Q15678 1187 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 INAQ16352 499 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 KIAA1644Q3SXP7 199 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 FAM76BQ5HYJ3 339 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC35E4Q6ICL7 350 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 TCEAL6Q6IPX3 200 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF790Q6PG37 636 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 PSRC1Q6PGN9 363 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 GDPD4Q6W3E5 623 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 TMEM64Q6YI46 380 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 ADCK1Q86TW2 530 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF444Q8N0Y2 327 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC43A2Q8N370 569 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 TRIM58Q8NG06 486 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR13C5Q8NGS8 318 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 SMPDL3AQ92484 453 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 GIMAP5Q96F15 307 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 C14orf79Q96F83 325 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 LURAP1Q96LR2 239 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCM2Q9BSQ5 444 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 ANP32EQ9BTT0 268 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 FNDC4Q9H6D8 234 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC52A3Q9NQ40 469 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF71Q9NQZ8 489 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 DDX28Q9NUL7 540 aaKnown RBP4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 IL20RAQ9UHF4 553 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 SH3BGRL2Q9UJC5 107 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 ERVK-19Q9WJR5 959 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 STK36Q9NRP7 1315 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 TRIM64CA6NLI5 447 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 LMO7DNF2Z398 122 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 FGF17O60258 216 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 CT45A8P0DMV1 189 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 CT45A9P0DMV2 189 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 EZRP15311 586 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 RPL35AP18077 110 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 FCARP24071 287 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 DNAJB1P25685 340 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 KIF5BP33176 963 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 TIMP3P35625 211 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 SOX3P41225 446 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 ACAA2P42765 397 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 SSR1P43307 286 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 ASMTP46597 345 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC6A12P48065 614 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 LEPRP48357 1165 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCR4P51679 360 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 MFGE8Q08431 387 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 KLHL30Q0D2K2 578 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 FHL1Q13642 323 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 HEPACAMQ14CZ8 416 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZRSR1Q15695 479 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF718Q3SXZ3 478 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF672Q499Z4 452 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 FASTKD1Q53R41 847 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 CT45A2Q5DJT8 189 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 C9orf50Q5SZB4 431 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 ARHGEF16Q5VV41 709 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 LYPLAL1Q5VWZ2 237 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 NKAIN2Q5VXU1 208 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 TRIM65Q6PJ69 517 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 SH2D5Q6ZV89 423 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 SYVN1Q86TM6 617 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 LACC1Q8IV20 430 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 WDR49Q8IV35 697 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 DCLK2Q8N568 766 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 MINDY2Q8NBR6 621 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 ADAD2Q8NCV1 583 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 GPRC5AQ8NFJ5 357 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR56B1Q8NGI3 324 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR4L1Q8NH43 312 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 GPR148Q8TDV2 347 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 DQX1Q8TE96 717 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 CASP10Q92851 521 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 NECTIN4Q96NY8 510 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 S1PR3Q99500 378 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 COQ7Q99807 217 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 JPH2Q9BR39 696 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 FAM49AQ9H0Q0 323 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 TRPV6Q9H1D0 765 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 MMP28Q9H239 520 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF334Q9HCZ1 680 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 TECRQ9NZ01 308 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 CNOT2Q9NZN8 540 aaKnown RBP4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 COPS7AQ9UBW8 275 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 CLIP2Q9UDT6 1046 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 PLA2G4CQ9UP65 541 aa4.39□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR1A2Q9Y585 309 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms