RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 A8MVJ9 347 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 MED26O95402 600 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 C6orf47O95873 294 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 CKMP06732 381 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 C8AP07357 584 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 POU2F1P14859 743 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 PBX2P40425 430 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 PCYT1AP49585 367 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 DOC2BQ14184 412 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 COL13A1Q5TAT6 717 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 GDPD3Q7L5L3 318 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 ZNF367Q7RTV3 350 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 HSD11B1LQ7Z5J1 315 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 NLRP8Q86W28 1048 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 CMTM8Q8IZV2 173 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 SLC7A5P1Q8MH63 180 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 LILRA3Q8N6C8 439 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 MRPL43Q8N983 215 aaKnown RBP17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 OR52N2Q8NGI0 321 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 BHLHE41Q9C0J9 482 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 ITM2CQ9NQX7 267 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 ACER3Q9NUN7 267 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 ACSL6Q9UKU0 697 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 IRAK3Q9Y616 596 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 KMOO15229 486 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 ASNA1O43681 348 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 KIAA0513O60268 411 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 ADH1AP07327 375 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 IMPA1P29218 277 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 HLA-FP30511 346 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 RCVRNP35243 200 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 PREPP48147 710 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 OLR1P78380 273 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 CCBE1Q6UXH8 406 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 NLGN4XQ8N0W4 816 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 ATL1Q8WXF7 558 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 CERS4Q9HA82 394 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 PRAMEF33A0A0G2JMD5 474 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 PRAMEF10O60809 474 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 AP2A2O94973 939 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 POP4O95707 220 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 SLC16A8O95907 504 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 ETV6P41212 452 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 LIMS1P48059 325 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 NKX2-5P52952 324 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 EEF1A2Q05639 463 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 PCDH1Q08174 1060 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 PTGES3Q15185 160 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 SF3B4Q15427 424 aaKnown RBP eCLIP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 CCDC80Q76M96 950 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 KREMEN2Q8NCW0 462 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 OR56A3Q8NH54 315 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 GTPBP3Q969Y2 492 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 CIDECQ96AQ7 238 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 FAM129BQ96TA1 746 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 PKP4Q99569 1192 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 SDHCQ99643 169 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 ROGDIQ9GZN7 287 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 FAM83DQ9H4H8 585 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 REEP4Q9H6H4 257 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 ZNF556Q9HAH1 456 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 C1GALT1Q9NS00 363 aa17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 YBX2Q9Y2T7 364 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 MTCL1Q9Y4B5 1905 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-202ENST00000394633 PLK4O00444 970 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 NPC1O15118 1278 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 TSPAN6O43657 245 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 DYRK3O43781 588 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 GBAP04062 536 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 EIF2S1P05198 315 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 CBLP22681 906 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 GABRR2P28476 465 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 XCR1P46094 333 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 MC1RQ01726 317 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 RBBP4Q09028 425 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 FCHO2Q0JRZ9 810 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 LRRC74AQ0VAA2 488 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 TSTQ16762 297 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 TOR1AIP1Q5JTV8 583 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 C19orf48Q6RUI8 117 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 GAREM2Q75VX8 874 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 SPATC1Q76KD6 591 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 C9orf43Q8TAL5 461 aaPredicted RBP17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 CXorf40BQ96DE9 158 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 TMEM121BQ9BXQ6 578 aaPredicted RBP17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 FADS2P1A8MWK0 482 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 C5orf67F2Z3F1 127 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 ZW10O43264 779 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 ITGA2P17301 1181 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 PIK3CBP42338 1070 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 NR4A2P43354 598 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 TP53BP2Q13625 1128 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 ELOAQ14241 798 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 MED22Q15528 200 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 MPEG1Q2M385 716 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 SYTL3Q4VX76 610 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 Q6ZVL8 140 aa17.55■□□□□ 0.4
PCDHA1-202ENST00000394633 Q6ZVU0 165 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms