RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ANXA5P08758 320 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 M6PRP20645 277 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 SOX9P48436 509 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 NRIP1P48552 1158 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 ARHGDIAP52565 204 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 SNRPD1P62314 119 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 POU4F3Q15319 338 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CDKN3Q16667 212 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 SPATS1Q496A3 300 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CCSMST1Q4G0I0 132 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 FLYWCH1Q4VC44 716 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 MPPE1Q53F39 396 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CAPN13Q6MZZ7 669 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 C22orf39Q6P5X5 142 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 UTP15Q8TED0 518 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 FBLIM1Q8WUP2 373 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 FAM120BQ96EK7 910 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 APIPQ96GX9 242 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 FRMD6Q96NE9 622 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 MCCC1Q96RQ3 725 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 C12orf10Q9HB07 376 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CCNB1IP1Q9NPC3 277 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 GPRC5BQ9NZH0 403 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 SNX7Q9UNH6 387 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 MYO15AQ9UKN7 3530 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 IFRD1O00458 451 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 PER2O15055 1255 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 NUPL2O15504 423 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CLDN9O95484 217 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CPSF4O95639 269 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CXCL10P02778 98 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 GBAP04062 536 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 PDGFAP04085 211 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 HIST1H2AGP0C0S8 130 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 HIST1H2ADP20671 130 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 DDCP20711 480 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 RPS3P23396 243 aaKnown RBP eCLIP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 RGS6P49758 472 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 TEAD2Q15562 447 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CCDC85BQ15834 202 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 KIAA1614Q5VZ46 1190 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 OR4F3Q6IEY1 312 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 TMPRSS11AQ6ZMR5 421 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 USP45Q70EL2 814 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 MSRB3Q8IXL7 192 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 C2orf73Q8N5S3 287 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 GALNT11Q8NCW6 608 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 NLGN4YQ8NFZ3 816 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 ASB15Q8WXK1 588 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 HIST1H2AHQ96KK5 128 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 PPP3R2Q96LZ3 170 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 HIST1H2AJQ99878 128 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 H2AFJQ9BTM1 129 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 WRAP53Q9BUR4 548 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 GORASP2Q9H8Y8 452 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CCL27Q9Y4X3 112 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 PRUNE2Q8WUY3 3088 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 B4DXG7 233 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 EFEMP2O95967 443 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 EPORP19235 508 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 AQP1P29972 269 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 NSG1P42857 185 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 AP2S1P53680 142 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 TAGLNQ01995 201 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 HYAL2Q12891 473 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 SLC14A1Q13336 389 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 ZNF79Q15937 498 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 RFX4Q33E94 735 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 SPDYE7PQ495Y7 208 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 ARSIQ5FYB1 569 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 SHQ1Q6PI26 577 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 TPRG1Q6ZUI0 275 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 HSD11B1LQ7Z5J1 315 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 KCTD20Q7Z5Y7 419 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 TMC8Q8IU68 726 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 PHC2Q8IXK0 858 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 CHPFQ8IZ52 775 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 KREMEN2Q8NCW0 462 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 GPR156Q8NFN8 814 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 ENKURQ8TC29 256 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 GGHQ92820 318 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 SCRN2Q96FV2 425 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 HTATIP2Q9BUP3 242 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 NXF2Q9GZY0 626 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 RETREG1Q9H6L5 497 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 IL1RAPQ9NPH3 570 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 HEBP1Q9NRV9 189 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 DCAF13Q9NV06 445 aaKnown RBP9.56□□□□□ -0.88
PSEN1-204ENST00000394164 SLC6A14Q9UN76 642 aa9.56□□□□□ -0.88
PSEN1-204ENST00000394164 ATG2BQ96BY7 2078 aa9.55□□□□□ -0.88
PSEN1-204ENST00000394164 SPTBN5Q9NRC6 3674 aaKnown RBP9.55□□□□□ -0.88
PSEN1-204ENST00000394164 ANTXRLA6NF34 631 aa9.55□□□□□ -0.88
PSEN1-204ENST00000394164 PRAMEF4O60810 478 aa9.55□□□□□ -0.88
PSEN1-204ENST00000394164 SNX4O95219 450 aa9.55□□□□□ -0.88
PSEN1-204ENST00000394164 C1SP09871 688 aa9.55□□□□□ -0.88
PSEN1-204ENST00000394164 RPS19P39019 145 aaKnown RBP9.55□□□□□ -0.88
PSEN1-204ENST00000394164 KIR2DL3P43628 341 aa9.55□□□□□ -0.88
PSEN1-204ENST00000394164 METAP1P53582 386 aa9.55□□□□□ -0.88
PSEN1-204ENST00000394164 DOC2BQ14184 412 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms