RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MOCS1Q9NZB8 636 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 GPRC5BQ9NZH0 403 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 ZNF223Q9UK11 482 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 CHMP2BQ9UQN3 213 aa16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 MRPS33Q9Y291 106 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-202ENST00000394082 A0A1B0GTH9 108 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 CDC7O00311 574 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 FANCGO15287 622 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 ZFAND5O76080 213 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 TUBB4AP04350 444 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 TCP1P17987 556 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 IGFBP2P18065 325 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 GGT5P36269 586 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 SSR4P51571 173 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 RAB38P57729 211 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 RCN2Q14257 317 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 TESK1Q15569 626 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 SPNS3Q6ZMD2 512 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 RGS9BPQ6ZS82 235 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 KRT78Q8N1N4 520 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 TCAIMQ8N3R3 496 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 C7orf57Q8NEG2 295 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 CHTF18Q8WVB6 975 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 RHBDF1Q96CC6 855 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 CFAP36Q96G28 342 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 VPS39Q96JC1 886 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 EGFL8Q99944 293 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 CCDC77Q9BR77 488 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 MCMBPQ9BTE3 642 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 RHBGQ9H310 441 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 TP63Q9H3D4 680 aaPredicted RBP16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 PRTFDC1Q9NRG1 225 aa16.29■□□□□ 0.2
SNRPA1-202ENST00000394082 FAM95CA0A1B0GW59 222 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 A8MUA0 341 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 B3GALT2O43825 422 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 HS6ST1O60243 411 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 WDR47O94967 919 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 HNRNPH1P31943 449 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 ARL4CP56559 192 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 TAS2R39P59534 338 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 RUNX2Q13950 521 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 EFTUD2Q15029 972 aaKnown RBP eCLIP16.28■□□□□ 0.26e-8■■■■□ 23.5
SNRPA1-202ENST00000394082 ELAVL1Q15717 326 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 PAOXQ6QHF9 649 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 NCCRP1Q6ZVX7 275 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 MDGA2Q7Z553 956 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 TMEM132CQ8N3T6 1108 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 OR2L5Q8NG80 312 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 LILRB4Q8NHJ6 448 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 NCLNQ969V3 563 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 QRFPRQ96P65 431 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 SERINC2Q96SA4 455 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 CTNNAL1Q9UBT7 734 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 FBXW2Q9UKT8 454 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 PSAT1Q9Y617 370 aa16.28■□□□□ 0.2
SNRPA1-202ENST00000394082 NPEPPSL1A6NEC2 478 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 TMEM200CA6NKL6 621 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 FOXO6A8MYZ6 492 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 E7ESA3 106 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 CYR61O00622 381 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 ZSCAN12O43309 604 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 ERI3O43414 337 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 TPOP07202 933 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 CHRNB4P30926 498 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 SLC13A2Q13183 592 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 SLBPQ14493 270 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 TGFBIQ15582 683 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 TSNQ15631 228 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 TRIM40Q6P9F5 258 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 C3P1Q6ZMU1 363 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 FRA10AC1Q70Z53 315 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 CD163Q86VB7 1156 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 MORN4Q8NDC4 146 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 PSD4Q8NDX1 1056 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 OR8K3Q8NH51 312 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 ANKRD49Q8WVL7 239 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 DAZLQ92904 295 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 WDR34Q96EX3 536 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 DERL2Q9GZP9 239 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 REXO4Q9GZR2 422 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 RHOJQ9H4E5 214 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 ZDHHC11Q9H8X9 412 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 CNOT10Q9H9A5 744 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 PNO1Q9NRX1 252 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 MYOTQ9UBF9 498 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 VTI1BQ9UEU0 232 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 DAPP1Q9UN19 280 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 HRH3Q9Y5N1 445 aa16.27■□□□□ 0.2
SNRPA1-202ENST00000394082 OR14I1A6ND48 311 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 ANKDD1BA6NHY2 528 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 USP27XA6NNY8 438 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 A8MVJ9 347 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 TGFBR3LH3BV60 316 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 TP73O15350 636 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 ZNHIT1O43257 154 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 CTNSO60931 367 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 SEC31AO94979 1220 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 WISP3O95389 354 aaPredicted RBP16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 TBX6O95947 436 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms