RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 DUSP23Q9BVJ7 150 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 C1QTNF1Q9BXJ1 281 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 SLC39A1Q9NY26 324 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 SZT2Q5T011 3432 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 GTPBP1O00178 669 aaKnown RBP9.86□□□□□ -0.83
COL6A3-205ENST00000392004 MANBAO00462 879 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 SCN2BO60939 215 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 TTKP33981 857 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 SRSF11Q05519 484 aaKnown RBP9.86□□□□□ -0.83
COL6A3-205ENST00000392004 SLAMF1Q13291 335 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 TRIM25Q14258 630 aaKnown RBP9.86□□□□□ -0.83
COL6A3-205ENST00000392004 HEPACAMQ14CZ8 416 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 NSDHLQ15738 373 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 FAM214AQ32MH5 1076 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 LETMD1Q6P1Q0 360 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 KAT2AQ92830 837 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 C12orf43Q96C57 262 aaKnown RBP9.86□□□□□ -0.83
COL6A3-205ENST00000392004 SLC12A9Q9BXP2 914 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 IGSF5Q9NSI5 407 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 UTS2RQ9UKP6 389 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 TECTAO75443 2155 aa9.86□□□□□ -0.83
COL6A3-205ENST00000392004 KIR2DS5A0A0G2JLQ3 304 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 A0A0G2JNG1 304 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 SAC3D1A6NKF1 404 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 KIR2DS3K7RE56 304 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ZNF646O15015 1829 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-205ENST00000392004 SLC28A2O43868 658 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 BMP10O95393 424 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 SLC7A2P52569 658 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ERVPABLB-1P60509 514 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 GRB7Q14451 532 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 KIR2DS5Q14953 304 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 PLK5Q496M5 336 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 CYP27C1Q4G0S4 372 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 MTX3Q5HYI7 312 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 FAM217AQ8IXS0 508 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 KLHDC8AQ8IYD2 350 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 TMEM156Q8N614 296 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 KRTCAP2Q8N6L1 136 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 OR9A4Q8NGU2 314 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 GPR150Q8NGU9 434 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 VANGL1Q8TAA9 524 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-205ENST00000392004 RHBDF1Q96CC6 855 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ISOC1Q96CN7 298 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ECHDC3Q96DC8 303 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 KCTD14Q9BQ13 255 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-205ENST00000392004 NUDT22Q9BRQ3 303 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ZNF232Q9UNY5 417 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 OARD1Q9Y530 152 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 CHD8Q9HCK8 2581 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 TPST2O60704 377 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 TFPTP0C1Z6 253 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ATP6V1B2P21281 511 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ATP6V1E1P36543 226 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 MAGEA3P43357 314 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ARHGDIAP52565 204 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 TPRG1LQ5T0D9 272 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 OTUD3Q5T2D3 398 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ADAMTSL4Q6UY14 1074 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 TMEM102Q8N9M5 508 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-205ENST00000392004 CYGBQ8WWM9 190 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ASB11Q8WXH4 323 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 NAT6Q93015 286 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ASB9Q96DX5 294 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ULBP3Q9BZM4 244 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 TRIM15Q9C019 465 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 PPIEQ9UNP9 301 aaKnown RBP9.85□□□□□ -0.83
COL6A3-205ENST00000392004 PCNX1Q96RV3 2341 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 E7ENX8 843 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 PEX12O00623 359 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ZBTB11O95625 1053 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-205ENST00000392004 UMPSP11172 480 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 IL10P22301 178 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 EEF1B2P24534 225 aaKnown RBP9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ARRB2P32121 409 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 HSD17B2P37059 387 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 GRK6P43250 576 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 MTPNP58546 118 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 UFM1P61960 85 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 B4GALNT1Q00973 533 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 TAP2Q03519 686 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 FGD3Q5JSP0 725 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 GPR107Q5VW38 600 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ABHD13Q7L211 337 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 GATSQ8NAP1 163 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 IFI44Q8TCB0 444 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 CMTM7Q96FZ5 175 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ZNF597Q96LX8 424 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 SLC25A23Q9BV35 468 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 CXorf21Q9HAI6 301 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 MRGBPQ9NV56 204 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 GIN1Q9NXP7 522 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ANGPT4Q9Y264 503 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 NOTCH4Q99466 2003 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ANK1P16157 1881 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 ICE1Q9Y2F5 2266 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 C7orf72A4D263 438 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 LDB3O75112 727 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 HEXBP07686 556 aa9.85□□□□□ -0.83
COL6A3-205ENST00000392004 CHRM5P08912 532 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms