RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 ITGA11Q9UKX5 1188 aa4.56□□□□□ -1.68
SNORA40.4-201ENST00000390971 AGRNO00468 2067 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 PFASO15067 1338 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 YDJCA8MPS7 323 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 KBTBD13C9JR72 458 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 SH3BGRLO75368 114 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 FGF19O95750 216 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 CASTP20810 708 aaKnown RBP4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 SRD5A2P31213 254 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 FOLH1Q04609 750 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 PLPP4Q5VZY2 271 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 RPAINQ86UA6 219 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 SLC43A2Q8N370 569 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 OR13C5Q8NGS8 318 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 DEPDC1BQ8WUY9 529 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 SLC35C1Q96A29 364 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 ATG101Q9BSB4 218 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 LSG1Q9H089 658 aaKnown RBP4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 MTIF3Q9H2K0 278 aaKnown RBP4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 VIPAS39Q9H9C1 493 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 UBQLN2Q9UHD9 624 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 POMT1Q9Y6A1 747 aa4.55□□□□□ -1.68
SNORA40.4-201ENST00000390971 ZNF840PA6NDX5 716 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 PHOX2AO14813 284 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 SLC30A4O14863 429 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 MELTFP08582 738 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 IER3P46695 156 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 C3AR1Q16581 482 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 RFTN2Q52LD8 501 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 MSANTD1Q6ZTZ1 278 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 VSIG1Q86XK7 387 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 SIX6OS1Q8N1H7 587 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 RNF149Q8NC42 400 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 CKAP2Q8WWK9 683 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 SMPDL3AQ92484 453 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 BPIFA2Q96DR5 249 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 TNFRSF13CQ96RJ3 184 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 CCM2Q9BSQ5 444 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 SP140LQ9H930 580 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 MARCH7Q9H992 704 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 DEPPQ9NTK1 212 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 NRBP1Q9UHY1 535 aa4.54□□□□□ -1.68
SNORA40.4-201ENST00000390971 A0A087WWV3 80 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 ANKDD1BA6NHY2 528 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 RPL37AP8A6NKH3 93 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 PHF1O43189 567 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 CLN5O75503 358 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 HSPA4LO95757 839 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 IGKV3-15P01624 115 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 MT-ND1P03886 318 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 SLC1A4P43007 532 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 BACE1P56817 501 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 TSPY1Q01534 308 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 RBBP4Q09028 425 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 CEACAM7Q14002 265 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 ECSCRQ19T08 205 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 MUC21Q5SSG8 566 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 EMBQ6PCB8 327 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 DCLRE1AQ6PJP8 1040 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 REG3GQ6UW15 175 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 ADCK1Q86TW2 530 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 TBC1D10CQ8IV04 446 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 KLHL7Q8IXQ5 586 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 TDHQ8IZJ6 230 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 BANPQ8N9N5 519 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 OR1B1Q8NGR6 318 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 UBLCP1Q8WVY7 318 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 ANKRD27Q96NW4 1050 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 CITED2Q99967 270 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 C17orf62Q9BQA9 187 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 PLEKHA3Q9HB20 300 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 UBE2TQ9NPD8 197 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 SLCO1C1Q9NYB5 712 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 ZNF581Q9P0T4 197 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 VPS18Q9P253 973 aa4.53□□□□□ -1.68
SNORA40.4-201ENST00000390971 IGHV3-16A0A0C4DH30 117 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 BCLAF3A2AJT9 711 aaKnown RBP4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 M0R296 226 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 P2RX6O15547 441 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 PRDM1O75626 825 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 GSK3BP49841 420 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 POM121L1PQ3SYA9 428 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 TEX35Q5T0J7 233 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 ZNF776Q68DI1 518 aaPredicted RBP4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 PM20D1Q6GTS8 502 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 GLRX5Q86SX6 157 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 NME8Q8N427 588 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 OR6F1Q8NGZ6 308 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 PCNPQ8WW12 178 aaKnown RBP4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 LIPHQ8WWY8 451 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 SEPT8Q92599 483 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 CORO2AQ92828 525 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 PARK7Q99497 189 aaKnown RBP4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 THUMPD3Q9BV44 507 aaKnown RBP4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 IDI2Q9BXS1 227 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 NMUR1Q9HB89 426 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 ZCCHC17Q9NP64 241 aaKnown RBP4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 GPR173Q9NS66 373 aa4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 NIP7Q9Y221 180 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNORA40.4-201ENST00000390971 HBS1LQ9Y450 684 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms