RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MAF1Q9H063 256 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 C10orf88Q9H8K7 445 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 CUTCQ9NTM9 273 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 GTF3C4Q9UKN8 822 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 NCKAP1Q9Y2A7 1128 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 SLC6A5Q9Y345 797 aa2.33□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF732B4DXR9 585 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 PENKP01210 267 aaPredicted RBP2.32□□□□□ -2.04
TRAV40-201ENST00000390467 SPP1P10451 314 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 LBPP18428 481 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 FASP25445 335 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 SPRP35270 261 aaPredicted RBP2.32□□□□□ -2.04
TRAV40-201ENST00000390467 ADARP55265 1226 aaKnown RBP2.32□□□□□ -2.04
TRAV40-201ENST00000390467 CNTN1Q12860 1018 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 TNK1Q13470 666 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 EIF4EBP2Q13542 120 aaPredicted RBP2.32□□□□□ -2.04
TRAV40-201ENST00000390467 KYNUQ16719 465 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 C2orf83Q53S99 150 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 ZRANB3Q5FWF4 1079 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 VWA2Q5GFL6 755 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.32□□□□□ -2.04
TRAV40-201ENST00000390467 CFAP58Q5T655 872 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 FAM46CQ5VWP2 391 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 KLHL10Q6JEL2 608 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 C17orf107Q6ZR85 190 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 NUFIP2Q7Z417 695 aaKnown RBP2.32□□□□□ -2.04
TRAV40-201ENST00000390467 ABI3BPQ7Z7G0 1075 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 SLC26A7Q8TE54 656 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 GRK7Q8WTQ7 553 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 SMPDL3AQ92484 453 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 NAA11Q9BSU3 229 aaPredicted RBP2.32□□□□□ -2.04
TRAV40-201ENST00000390467 IL17CQ9P0M4 197 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 ITGA11Q9UKX5 1188 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 CPQQ9Y646 472 aa2.32□□□□□ -2.04
TRAV40-201ENST00000390467 KLF18A0A0U1RQI7 1052 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 FOXI3A8MTJ6 420 aaPredicted RBP2.31□□□□□ -2.04
TRAV40-201ENST00000390467 NPIPA3F8WFD2 350 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 H0Y9J4 135 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 FLRT2O43155 660 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 SRPX2O60687 465 aaPredicted RBP2.31□□□□□ -2.04
TRAV40-201ENST00000390467 TSC22D2O75157 780 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 FRAT2O75474 233 aaPredicted RBP2.31□□□□□ -2.04
TRAV40-201ENST00000390467 GGPS1O95749 300 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 PIGRP01833 764 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 SUPT20HL2P0C7V6 817 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 ATP6V1B1P15313 513 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 PSMB4P28070 264 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 CASP2P42575 452 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 OR3A3P47888 321 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 NAAAQ02083 359 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 CAMK2DQ13557 499 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 COG2Q14746 738 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 HYAL4Q2M3T9 481 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 CGB2Q6NT52 195 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 TDHQ8IZJ6 230 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 RAD54LQ92698 747 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 PHYHIPLQ96FC7 376 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 PPP1R16AQ96I34 528 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 MCCC1Q96RQ3 725 aaPredicted RBP2.31□□□□□ -2.04
TRAV40-201ENST00000390467 HSD17B14Q9BPX1 270 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 TMX4Q9H1E5 349 aaPredicted RBP2.31□□□□□ -2.04
TRAV40-201ENST00000390467 PNNQ9H307 717 aaKnown RBP2.31□□□□□ -2.04
TRAV40-201ENST00000390467 PDFQ9HBH1 243 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 TMOD3Q9NYL9 352 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 NOCTQ9UK39 431 aaKnown RBP2.31□□□□□ -2.04
TRAV40-201ENST00000390467 MGAT4AQ9UM21 535 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 SH3GLB1Q9Y371 365 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 FAM205AQ6ZU69 1335 aa2.31□□□□□ -2.04
TRAV40-201ENST00000390467 SYNDIG1LA6NDD5 238 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF724A8MTY0 619 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 CCDC188H7C350 402 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 HDAC3O15379 428 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 PPIP5K2O43314 1243 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 B4GAT1O43505 415 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 FCGR3BO75015 233 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 CALCAP01258 141 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 SP9P0CG40 484 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 MGMTP16455 207 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 ERCC2P18074 760 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 SRD5A2P31213 254 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 RPL9P32969 192 aaKnown RBP2.3□□□□□ -2.04
TRAV40-201ENST00000390467 RBBP4Q09028 425 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 PRPF4BQ13523 1007 aaKnown RBP2.3□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF273Q14593 569 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 PPA1Q15181 289 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 UGCGQ16739 394 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 KRT80Q6KB66 452 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 SLC27A4Q6P1M0 643 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 ARMCX5Q6P1M9 558 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 VASH2Q86V25 355 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 SLC43A2Q8N370 569 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 OR6F1Q8NGZ6 308 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 NCOA7Q8NI08 942 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 ESAMQ96AP7 390 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 RMDN1Q96DB5 314 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 AK8Q96MA6 479 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 CENPOQ9BU64 300 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 DEFB126Q9BYW3 111 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 UBQLN3Q9H347 655 aa2.3□□□□□ -2.04
TRAV40-201ENST00000390467 ZNF446Q9NWS9 450 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms