RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 CLEC2DQ9UHP7 191 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 CDH10Q9Y6N8 788 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 FAM25EA8MYX2 175 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 J3KR12 359 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 PIRTP0C851 137 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 FGFBP1Q14512 234 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 SPHARQ15513 63 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 IGSF11Q5DX21 431 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 MARC1Q5VT66 337 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 SERINC5Q86VE9 423 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 RGL4Q8IZJ4 473 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 CARNMT1Q8N4J0 409 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 CHCHD4Q8N4Q1 142 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 ARRDC2Q8TBH0 407 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 RANBP3Q9H6Z4 567 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 B3GAT2Q9NPZ5 323 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 NUDT4Q9NZJ9 180 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 TPST2O60704 377 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CCNB2O95067 398 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 IFNA7P01567 189 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 LHCGRP22888 699 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 KELP23276 732 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 ZNF33BQ06732 778 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 ZNF273Q14593 569 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 SDHAF4Q5VUM1 108 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 TRIM46Q7Z4K8 759 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CPA6Q8N4T0 437 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 RTL3Q8N8U3 475 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 MTERF3Q96E29 417 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 FCRL2Q96LA5 508 aaPredicted RBP14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 HTATIP2Q9BUP3 242 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CCSER2Q9H7U1 834 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 ANKRA2Q9H9E1 313 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 MCCC2Q9HCC0 563 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 TMCC3Q9ULS5 477 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CASP8AP2Q9UKL3 1982 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 A0A1B0GVM2 712 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 OR5K4A6NMS3 321 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 HHLA1C9JL84 531 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 RFXANKO14593 260 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 KHNYNO15037 678 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 NIPSNAP2O75323 286 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CSO75390 466 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 NDUFS3O75489 264 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 ANXA8P13928 327 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 LHX1P48742 406 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CRYBA2P53672 197 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 EPHA5P54756 1037 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CLDN8P56748 225 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 KLHL22Q53GT1 634 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 SGO1Q5FBB7 561 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CFAP77Q6ZQR2 320 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 PHF21AQ96BD5 680 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 KCNJ15Q99712 375 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 TMEM43Q9BTV4 400 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 TXNL4BQ9NX01 149 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CLIC1O00299 241 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 QSOX1O00391 747 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 B4GALT3O60512 393 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 MPC2O95563 127 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 PIPP12273 146 aaPredicted RBP14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 ATF6P18850 670 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 HK1P19367 917 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 GRK4P32298 578 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 HTR7P34969 479 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 AGFG1P52594 562 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 RPA4Q13156 261 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 TMEM107Q6UX40 140 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CD200R1Q8TD46 325 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CREB3L1Q96BA8 519 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 RBP7Q96R05 134 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 DPH2Q9BQC3 489 aaPredicted RBP14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 SLC28A3Q9HAS3 691 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 FOLH1BQ9HBA9 442 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 CLN6Q9NWW5 311 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 IL20Q9NYY1 176 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 UBQLN2Q9UHD9 624 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 PPT2Q9UMR5 302 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 NOD1Q9Y239 953 aa14.06□□□□□ -0.16
VPS9D1-201ENST00000389386 ODC1P11926 461 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 SRCP12931 536 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 ENGP17813 658 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 RPS14P62263 151 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 FAM189BP81408 668 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 EIF4EBP2Q13542 120 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 P2RY14Q15391 338 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 SF3A2Q15428 464 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 OR7G3Q8NG95 312 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 OR4C15Q8NGM1 316 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 WBP1Q96G27 269 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 CFHR5Q9BXR6 569 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 SHARPINQ9H0F6 387 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 IFT46Q9NQC8 304 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 DLGAP4Q9Y2H0 992 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 PADI2Q9Y2J8 665 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 A0A0A6YYJ9 748 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 TMEM229AB2RXF0 380 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 ULK1O75385 1050 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms