RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 TRAM1L1Q8N609 369 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 SCAMP4Q969E2 229 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 UBE2FQ969M7 185 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 NXPE3Q969Y0 559 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 TIFAQ96CG3 184 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 MED30Q96HR3 178 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 ST6GAL2Q96JF0 529 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 OR2A14Q96R47 310 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 SDHCQ99643 169 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-202ENST00000381990 EGFL8Q99944 293 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 INPP5KQ9BT40 448 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 CENPOQ9BU64 300 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 PBX4Q9BYU1 374 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 ABCG8Q9H221 673 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 NKX2-4Q9H2Z4 354 aa8.58□□□□□ -1.04
GPNMB-202ENST00000381990 FARSBQ9NSD9 589 aaKnown RBP8.58□□□□□ -1.04
GPNMB-202ENST00000381990 OTOL1A6NHN0 477 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 HMX3A6NHT5 357 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 H3BQ06 376 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CLIC1O00299 241 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 KPNA3O00505 521 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 PRMT3O60678 531 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 EPN2O95208 641 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 KCNK5O95279 499 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CLDN9O95484 217 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 YES1P07947 543 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ATP1B2P14415 290 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 PRKCAP17252 672 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 MAGP20916 626 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 AOAHP28039 575 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ETV3P41162 512 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 KIR3DL1P43629 444 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 MTAPQ13126 283 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 IRF3Q14653 427 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 DUOXA1Q1HG43 343 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 HNRNPA1L2Q32P51 320 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 FNDC3BQ53EP0 1204 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CDKL4Q5MAI5 379 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 HENMT1Q5T8I9 393 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 PPP2R2DQ66LE6 453 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 PARS2Q7L3T8 475 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ANGPTL6Q8NI99 470 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 TRNT1Q96Q11 434 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CHCHD6Q9BRQ6 235 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ZSCAN5AQ9BUG6 496 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 APOL5Q9BWW9 433 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CDCA4Q9BXL8 241 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ACPTQ9BZG2 426 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 MIR1-1HGQ9H1L0 117 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 OR51E2Q9H255 320 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ENOPH1Q9UHY7 261 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 TBC1D24Q9ULP9 559 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 KIF26AQ9ULI4 1882 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 MYO9BQ13459 2157 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 EDDM13A0A1B0GTR0 161 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 KPNA5O15131 536 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 TPD52L2O43399 206 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 AP2A2O94973 939 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 GUCA1CO95843 209 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ANXA8P13928 327 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 PRPS1L1P21108 318 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 FCARP24071 287 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 GRK5P34947 590 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 SLC19A1P41440 591 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ALDH9A1P49189 494 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 SRSF11Q05519 484 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ZNF284Q2VY69 593 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 GGTA1PQ4G0N0 100 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 BCL7AQ4VC05 210 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ARMC4Q5T2S8 1044 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 GPR153Q6NV75 609 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 LIPIQ6XZB0 460 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 GDPGP1Q6ZNW5 385 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ZNF551Q7Z340 670 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 NRARPQ7Z6K4 114 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 TECPR1Q7Z6L1 1165 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 VTCN1Q7Z7D3 282 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 GATAD2AQ86YP4 633 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 TMIEQ8NEW7 156 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CLHC1Q8NHS4 586 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CSGALNACT1Q8TDX6 532 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 OR8D1Q8WZ84 308 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 Q96MT0 163 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 TMEM246Q9BRR3 403 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 RIOK2Q9BVS4 552 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 RACGAP1Q9H0H5 632 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 ADPRHL2Q9NX46 363 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 SIRT5Q9NXA8 310 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CNOT2Q9NZN8 540 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 MSRAQ9UJ68 235 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 SNX6Q9UNH7 406 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CORO2BQ9UQ03 480 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 CARD8Q9Y2G2 431 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 POFUT2Q9Y2G5 429 aa8.57□□□□□ -1.04
GPNMB-202ENST00000381990 TCF20Q9UGU0 1960 aaKnown RBP8.57□□□□□ -1.04
GPNMB-202ENST00000381990 MUC22E2RYF6 1773 aaPredicted RBP8.56□□□□□ -1.04
GPNMB-202ENST00000381990 SH3D21A4FU49 640 aa8.56□□□□□ -1.04
GPNMB-202ENST00000381990 EFCAB10A6NFE3 127 aa8.56□□□□□ -1.04
GPNMB-202ENST00000381990 LOC730098B7Z3J9 87 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms