RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CAPNS2Q96L46 248 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 HDHD2Q9H0R4 259 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 ASB8Q9H765 288 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 TPT1P8Q9HAU6 139 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 GALNT9Q9HCQ5 603 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 CLN6Q9NWW5 311 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 SSR3Q9UNL2 185 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 PCDHGB2Q9Y5G2 931 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 ALG5Q9Y673 324 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 STK16O75716 305 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 CCNB2O95067 398 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 KCNK5O95279 499 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 IGFBP1P08833 259 aaPredicted RBP13.29□□□□□ -0.28
SDC1-202ENST00000381150 SLC2A2P11168 524 aaPredicted RBP13.29□□□□□ -0.28
SDC1-202ENST00000381150 CD9P21926 228 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 ERP29P30040 261 aaKnown RBP13.29□□□□□ -0.28
SDC1-202ENST00000381150 CNR2P34972 360 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 FBXO43Q4G163 708 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 IQCCQ4KMZ1 466 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 RNF219Q5W0B1 726 aaPredicted RBP13.29□□□□□ -0.28
SDC1-202ENST00000381150 SBSNQ6UWP8 590 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.29□□□□□ -0.285e-7■■□□□ 13.2
SDC1-202ENST00000381150 PHC2Q8IXK0 858 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 GHDCQ8N2G8 530 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 NLGN4YQ8NFZ3 816 aaPredicted RBP13.29□□□□□ -0.28
SDC1-202ENST00000381150 OR5AK3PQ8NH89 298 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 LKAAEAR1Q8TD35 194 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 EID2BQ96D98 161 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 IGSF21Q96ID5 467 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 C1QTNF3Q9BXJ4 246 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 CDCP1Q9H5V8 836 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 SERHLQ9NQF3 203 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 NPAP1Q9NZP6 1156 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 POLHQ9Y253 713 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 SLC35F4A4IF30 521 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 PCDH17O14917 1159 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 MYL12BO14950 172 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 TAPBPO15533 448 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 SDC1P18827 310 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 SNAPC1Q16533 368 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 TOR2AQ5JU69 321 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 CELF5Q8N6W0 485 aaKnown RBP13.29□□□□□ -0.28
SDC1-202ENST00000381150 POF1BQ8WVV4 589 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 VWCEQ96DN2 955 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 ZNF226Q9NYT6 803 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 RAB23Q9ULC3 237 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 OR51B4Q9Y5P0 310 aa13.29□□□□□ -0.28
SDC1-202ENST00000381150 FZD6O60353 706 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 CLDN9O95484 217 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 PRAMEF12O95522 483 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 SSX1Q16384 188 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 NCEH1Q6PIU2 408 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 PLEKHM3Q6ZWE6 761 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 USP30Q70CQ3 517 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.28□□□□□ -0.28
SDC1-202ENST00000381150 SYT14Q8NB59 555 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 AQP11Q8NBQ7 271 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 SLC37A3Q8NCC5 494 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 ADAMTS19Q8TE59 1207 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 RIPOR3Q96MK2 946 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 PKP4Q99569 1192 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 ATP13A2Q9NQ11 1180 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 LHX3Q9UBR4 397 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 KCNN3Q9UGI6 736 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 ERVW-1Q9UQF0 538 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 NINQ8N4C6 2090 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 GNG14A0A1W2PPG7 69 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 ISM1B1AKI9 464 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 H7C0S8 307 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 POLR1CO15160 346 aaPredicted RBP13.28□□□□□ -0.28
SDC1-202ENST00000381150 UGT2B17O75795 530 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 OR7A10O76100 309 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 GNRH1P01148 92 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 ADRA2AP08913 450 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 CSF3P09919 207 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 IRF1P10914 325 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 SOAT1P35610 550 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 PTGES3Q15185 160 aaKnown RBP13.28□□□□□ -0.28
SDC1-202ENST00000381150 SLAIN1Q8ND83 568 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 ALG14Q96F25 216 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 TRMT2BQ96GJ1 504 aaKnown RBP13.28□□□□□ -0.28
SDC1-202ENST00000381150 FAM129BQ96TA1 746 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 TMEM121BQ9BXQ6 578 aaPredicted RBP13.28□□□□□ -0.28
SDC1-202ENST00000381150 TRPM5Q9NZQ8 1165 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 CRLS1Q9UJA2 301 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 VPS9D1Q9Y2B5 631 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 A0A0B4J293 547 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 ENTPD6O75354 484 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 TNNI3P19429 210 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 SSTR2P30874 369 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 HYAL2Q12891 473 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 DOC2BQ14184 412 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 GPR19Q15760 415 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 DUSP7Q16829 419 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 CDONQ4KMG0 1287 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 SERPINA9Q86WD7 417 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 NAGSQ8N159 534 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 OR4K1Q8NGD4 311 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 KCNJ9Q92806 393 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 RNF31Q96EP0 1072 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms