RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 RPS17P08708 135 aaKnown RBP20.34■□□□□ 0.85
SKI-201ENST00000378536 PGFP49763 221 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 PARM1Q6UWI2 310 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 KDM1BQ8NB78 822 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 NUP43Q8NFH3 380 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 NR4A3Q92570 626 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 ALKBH4Q9NXW9 302 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 SMU1Q2TAY7 513 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 DUS1LQ6P1R4 473 aaKnown RBP20.34■□□□□ 0.85
SKI-201ENST00000378536 ZFYVE21Q9BQ24 234 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 FTSJ1Q9UET6 329 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 HOXC11O43248 304 aaPredicted RBP20.34■□□□□ 0.85
SKI-201ENST00000378536 RPTNQ6XPR3 784 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 OR10Q1Q8NGQ4 319 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.34■□□□□ 0.857e-7■■■■■ 79.8
SKI-201ENST00000378536 OR51V1Q9H2C8 321 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 HCN1O60741 890 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 ERMP1Q7Z2K6 904 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 EPYCQ99645 322 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 PELOQ9BRX2 385 aaKnown RBP20.33■□□□□ 0.85
SKI-201ENST00000378536 METTL7AQ9H8H3 244 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 CD320Q9NPF0 282 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 IGLV3-25P01717 112 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 FHP07954 510 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 NFATC4Q14934 902 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 SLC5A9Q2M3M2 681 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.33■□□□□ 0.852e-6■■■□□ 16.6
SKI-201ENST00000378536 OTUD1Q5VV17 481 aaPredicted RBP20.33■□□□□ 0.85
SKI-201ENST00000378536 OR4K17Q8NGC6 315 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 ENKURQ8TC29 256 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 RELTQ969Z4 430 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 HDAC8Q9BY41 377 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 ADAMTS6Q9UKP5 1117 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 NRXN2Q9P2S2 1712 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 KIR2DS5A0A0G2JLQ3 304 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 A0A0G2JNG1 304 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 KIR2DS3K7RE56 304 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 PDLIM1O00151 329 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 OR12D1P0DN82 309 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 GCAP28676 217 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 GRM7Q14831 915 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 KIR2DS5Q14953 304 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 TCTE1Q5JU00 501 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 KIAA0895LQ68EN5 471 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 OR5M3Q8NGP4 307 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 PKP2Q99959 881 aa20.33■□□□□ 0.85
SKI-201ENST00000378536 FPR1P21462 350 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 MAGEA3P43357 314 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 ARHGAP19Q14CB8 494 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 ADAMTS18Q8TE60 1221 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 KIAA1143Q96AT1 154 aaPredicted RBP20.33■□□□□ 0.84
SKI-201ENST00000378536 RARRES3Q9UL19 164 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 ACVR2AP27037 513 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 MLLT1Q03111 559 aaPredicted RBP20.33■□□□□ 0.84
SKI-201ENST00000378536 ATP1A4Q13733 1029 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 CTC1Q2NKJ3 1217 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 ZCCHC12Q6PEW1 402 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 COMMD6Q7Z4G1 85 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 BRF2Q9HAW0 419 aa20.33■□□□□ 0.84
SKI-201ENST00000378536 ELL3Q9HB65 397 aaPredicted RBP20.33■□□□□ 0.84
SKI-201ENST00000378536 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.33■□□□□ 0.84
SKI-201ENST00000378536 WWP2O00308 870 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 KHNYNO15037 678 aaKnown RBP20.32■□□□□ 0.84
SKI-201ENST00000378536 RENP00797 406 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 HMGN1P05114 100 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 MLF2Q15773 248 aaPredicted RBP20.32■□□□□ 0.84
SKI-201ENST00000378536 C9orf50Q5SZB4 431 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 ALKBH2Q6NS38 261 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 IZUMO1Q8IYV9 350 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 HSPA12BQ96MM6 686 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 PBX2P40425 430 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 C16orf78Q8WTQ4 265 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 MCM8Q9UJA3 840 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 H3BNX3 289 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 DEFB133Q30KQ1 61 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 NDUFAF6Q330K2 333 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 TTLL10Q6ZVT0 673 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 ZSWIM3Q96MP5 696 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 ACTR10Q9NZ32 417 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 IFT52Q9Y366 437 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 EME2A4GXA9 379 aaPredicted RBP20.32■□□□□ 0.84
SKI-201ENST00000378536 CASKO14936 926 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 LINGO3P0C6S8 592 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 RBBP4Q09028 425 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 KLHL22Q53GT1 634 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 TRIM73Q86UV7 250 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 OR52E1Q8NGJ3 308 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 APIPQ96GX9 242 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 PDLIM5Q96HC4 596 aaKnown RBP20.32■□□□□ 0.84
SKI-201ENST00000378536 TM9SF3Q9HD45 589 aa20.32■□□□□ 0.84
SKI-201ENST00000378536 IGLV3-27P01718 113 aa20.31■□□□□ 0.84
SKI-201ENST00000378536 AK4P27144 223 aaPredicted RBP20.31■□□□□ 0.84
SKI-201ENST00000378536 PDHA2P29803 388 aa20.31■□□□□ 0.84
SKI-201ENST00000378536 CEP78Q5JTW2 689 aa20.31■□□□□ 0.84
SKI-201ENST00000378536 OR7G3Q8NG95 312 aa20.31■□□□□ 0.84
SKI-201ENST00000378536 SPRTNQ9H040 489 aaPredicted RBP20.31■□□□□ 0.84
SKI-201ENST00000378536 CD38P28907 300 aa20.31■□□□□ 0.84
SKI-201ENST00000378536 KIR2DS3Q14952 304 aa20.31■□□□□ 0.84
SKI-201ENST00000378536 HSF5Q4G112 596 aaPredicted RBP20.31■□□□□ 0.84
SKI-201ENST00000378536 IQCCQ4KMZ1 466 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms