RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 DNAJA4Q8WW22 397 aaPredicted RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 TFAP2CQ92754 450 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 MOAP1Q96BY2 351 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 CCDC32Q9BV29 185 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TIGARQ9NQ88 270 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 PCTPQ9UKL6 214 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 RFPL2O75678 378 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 PTTG1O95997 202 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 MT-ND5P03915 603 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 JUPP14923 745 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 CAPN3P20807 821 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 BMP8BP34820 402 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 HMGCLP35914 325 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TSPAN5P62079 268 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 SOX4Q06945 474 aaPredicted RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 GINS1Q14691 196 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 PON3Q15166 354 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 SPHARQ15513 63 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 FAM189A2Q15884 450 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TAZQ16635 292 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TMEM236Q5W0B7 351 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 EIF5AL1Q6IS14 154 aaKnown RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 BMP8AQ7Z5Y6 402 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 RNF130Q86XS8 419 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 ARFGAP1Q8N6T3 406 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 PSD4Q8NDX1 1056 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 DENND6BQ8NEG7 585 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 OR13J1Q8NGT2 312 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 ZCCHC10Q8TBK6 192 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 ZNF431Q8TF32 576 aaPredicted RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 MOCOSQ96EN8 888 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 SLC29A1Q99808 456 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 EVA1BQ9NVM1 165 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 B4GALT6Q9UBX8 382 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 UTS2RQ9UKP6 389 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 ZNF451Q9Y4E5 1061 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 CDH10Q9Y6N8 788 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 A0A0D9SEW6 157 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TCRBV3S1A0A5B6 114 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TEX46H3BTG2 121 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 OR1I1O60431 355 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 JUNP05412 331 aaKnown RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 RHCEP18577 417 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 HK1P19367 917 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TIA1P31483 386 aaKnown RBP eCLIP8.08□□□□□ -1.12
VPS36-201ENST00000378060 CD47Q08722 323 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 ZNF234Q14588 700 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TRAM1Q15629 374 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TBRG1Q3YBR2 411 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 LRRC73Q5JTD7 316 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 CDKL4Q5MAI5 379 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 C6orf183Q5T699 404 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 TXNDC8Q6A555 127 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 CCSAPQ6IQ19 270 aaPredicted RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 SLC27A4Q6P1M0 643 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 Q6ZVU0 165 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 ACOT12Q8WYK0 555 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 BARD1Q99728 777 aaKnown RBP8.08□□□□□ -1.12
VPS36-201ENST00000378060 CST11Q9H112 138 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 GSTO2Q9H4Y5 243 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 WDR26Q9H7D7 661 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 IGSF5Q9NSI5 407 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 MED31Q9Y3C7 131 aa8.08□□□□□ -1.12
VPS36-201ENST00000378060 SOX14O95416 240 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 OXSR1O95747 527 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 EDN1P05305 212 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 EPCAMP16422 314 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 CD68P34810 354 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 MAGEA2P43356 314 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 MAP2K4P45985 399 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 CRISP1P54107 249 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 PRMT2P55345 433 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 ERVK-21P61565 698 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 ABRAXAS2Q15018 415 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 PCBP2Q15366 365 aaKnown RBP eCLIP8.07□□□□□ -1.12
VPS36-201ENST00000378060 OR4D1Q15615 310 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 RAB6CQ53S08 254 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 VITQ6UXI7 678 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 GDPGP1Q6ZNW5 385 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 PLEKHG7Q6ZR37 379 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 ARMCX6Q7L4S7 300 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 TAF8Q7Z7C8 310 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 PLCZ1Q86YW0 608 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 GID4Q8IVV7 300 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 SDR16C5Q8N3Y7 309 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 CAMKVQ8NCB2 501 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 OR4K1Q8NGD4 311 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 GPR150Q8NGU9 434 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 BBS10Q8TAM1 723 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 GNPDA2Q8TDQ7 276 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 FUBP1Q96AE4 644 aaKnown RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 TBX5Q99593 518 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 WACQ9BTA9 647 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 TAPBPLQ9BX59 468 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 BCL2L14Q9BZR8 327 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 RAB6CQ9H0N0 254 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 ENAMQ9NRM1 1142 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 LYARQ9NX58 379 aaKnown RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 TAC3Q9UHF0 121 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 SCN10AQ9Y5Y9 1956 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms