RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 BTG2P78543 158 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 ELOAQ14241 798 aaKnown RBP15.79■□□□□ 0.12
HMGN4-201ENST00000377575 TSNAXIP1Q2TAA8 658 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 TECRLQ5HYJ1 363 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 ADNP2Q6IQ32 1131 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 RPUSD3Q6P087 351 aaKnown RBP15.79■□□□□ 0.12
HMGN4-201ENST00000377575 METTL2BQ6P1Q9 378 aaKnown RBP15.79■□□□□ 0.12
HMGN4-201ENST00000377575 ABHD17CQ6PCB6 329 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 LAS2Q8IYD9 372 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 SLC5A8Q8N695 610 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 TEX9Q8N6V9 391 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 CATSPER1Q8NEC5 780 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 OR1N1Q8NGS0 311 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 QRFPRQ96P65 431 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 GPR78Q96P69 363 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 BARD1Q99728 777 aaKnown RBP15.79■□□□□ 0.12
HMGN4-201ENST00000377575 MS4A8Q9BY19 250 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 ADGRE2Q9UHX3 823 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 COL12A1Q99715 3063 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 IGKV3D-11A0A0A0MRZ8 115 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 OR5H15A6NDH6 313 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 SAGE2PA6NJ88 616 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 FAM227AF5H4B4 570 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 CLDN4O14493 209 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 UGDHO60701 494 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 TBX6O95947 436 aaPredicted RBP15.78■□□□□ 0.12
HMGN4-201ENST00000377575 RHOXF2BP0C7M4 288 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 COL6A2P12110 1019 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 CERS1P27544 350 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 PHEXP78562 749 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 MRPL49Q13405 166 aaKnown RBP15.78■□□□□ 0.12
HMGN4-201ENST00000377575 RUNX2Q13950 521 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 MEP1AQ16819 746 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 TMEM35AQ53FP2 167 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 LGSNQ5TDP6 509 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 LIPJQ5W064 366 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 H3F3CQ6NXT2 135 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 TRMT10CQ7L0Y3 403 aaKnown RBP15.78■□□□□ 0.12
HMGN4-201ENST00000377575 MYLK4Q86YV6 388 aaPredicted RBP15.78■□□□□ 0.12
HMGN4-201ENST00000377575 CYP4X1Q8N118 509 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 UHMK1Q8TAS1 419 aaKnown RBP15.78■□□□□ 0.12
HMGN4-201ENST00000377575 ZNF473Q8WTR7 871 aaKnown RBP15.78■□□□□ 0.12
HMGN4-201ENST00000377575 DCAKDQ8WVC6 231 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 REPS1Q96D71 796 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 RHOXF2Q9BQY4 288 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 ACTR8Q9H981 624 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 PRTFDC1Q9NRG1 225 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 STMN3Q9NZ72 180 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 NTNG1Q9Y2I2 539 aa15.78■□□□□ 0.12
HMGN4-201ENST00000377575 ANKUB1A6NFN9 424 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 TRIM49D1C9J1S8 452 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 F10P00742 488 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 HSD17B7P56937 341 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 GTF2H2Q13888 395 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 PCBP2Q15366 365 aaKnown RBP eCLIP15.77■□□□□ 0.12
HMGN4-201ENST00000377575 TERF2Q15554 542 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 ACER2Q5QJU3 275 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 GTF2H2CQ6P1K8 395 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 CHSY3Q70JA7 882 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 SCUBE1Q8IWY4 988 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 ZNF595Q8IYB9 648 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 LGI4Q8N135 537 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 BEST3Q8N1M1 668 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 PLD6Q8N2A8 252 aaKnown RBP15.77■□□□□ 0.12
HMGN4-201ENST00000377575 BCORP1Q8N888 145 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 FAM47BQ8NA70 645 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 ST6GALNAC3Q8NDV1 305 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 OR7G3Q8NG95 312 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 GRHL3Q8TE85 626 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 CMTM7Q96FZ5 175 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 SCYL1Q96KG9 808 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 F2RL3Q96RI0 385 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 CENPKQ9BS16 269 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 TBCDQ9BTW9 1192 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 NECTIN3Q9NQS3 549 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 XPR1Q9UBH6 696 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 DAPP1Q9UN19 280 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 PCDHGA11Q9Y5H2 935 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 SPACA6W5XKT8 324 aa15.77■□□□□ 0.12
HMGN4-201ENST00000377575 HECTD1Q9ULT8 2610 aa15.77■□□□□ 0.11
HMGN4-201ENST00000377575 USP9XQ93008 2570 aaPredicted RBP15.77■□□□□ 0.11
HMGN4-201ENST00000377575 SMIM24O75264 130 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 AGFG2O95081 481 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 CBX6O95503 412 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 SNRPAP09012 282 aaKnown RBP15.76■□□□□ 0.11
HMGN4-201ENST00000377575 PIK3CBP42338 1070 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 LIM2P55344 173 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 SRSF1Q07955 248 aaKnown RBP eCLIP15.76■□□□□ 0.11
HMGN4-201ENST00000377575 SLC13A2Q13183 592 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 DDX39BQ13838 428 aaKnown RBP15.76■□□□□ 0.11
HMGN4-201ENST00000377575 FCRLBQ6BAA4 426 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 GOLGA7Q7Z5G4 137 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 CRLF3Q8IUI8 442 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 CNPY4Q8N129 248 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 AMER2Q8N7J2 671 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 PTGR2Q8N8N7 351 aaPredicted RBP15.76■□□□□ 0.11
HMGN4-201ENST00000377575 ELP5Q8TE02 316 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 FAR1Q8WVX9 515 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 MTBPQ96DY7 904 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 LYRM4Q9HD34 91 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms