RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 PDSS2Q86YH6 399 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 FNDC5Q8NAU1 212 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 SLC38A9Q8NBW4 561 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 OR2T11Q8NH01 316 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 C3orf30Q96M34 536 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF317Q96PQ6 595 aaPredicted RBP12.47□□□□□ -0.41
TIMP1-202ENST00000377017 YIPF2Q9BWQ6 316 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF717Q9BY31 904 aaPredicted RBP12.47□□□□□ -0.41
TIMP1-202ENST00000377017 SPRY4Q9C004 299 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 FAM117AQ9C073 453 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 NPHS2Q9NP85 383 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 MKKSQ9NPJ1 570 aaPredicted RBP12.47□□□□□ -0.41
TIMP1-202ENST00000377017 MS4A12Q9NXJ0 267 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 TRPC4Q9UBN4 977 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF282Q9UDV7 671 aaPredicted RBP12.47□□□□□ -0.41
TIMP1-202ENST00000377017 PHF11Q9UIL8 331 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 EIF3LQ9Y262 564 aaKnown RBP12.47□□□□□ -0.41
TIMP1-202ENST00000377017 MRPS33Q9Y291 106 aaKnown RBP12.47□□□□□ -0.41
TIMP1-202ENST00000377017 SDK2Q58EX2 2172 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
TIMP1-202ENST00000377017 GMNCA6NCL1 334 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 SDHDO14521 159 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 CHST10O43529 356 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 B3GALT4O96024 378 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 ALBP02768 609 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 ANXA4P09525 319 aaPredicted RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 RNH1P13489 461 aaKnown RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 PCSK2P16519 638 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 TLX1P31314 330 aaPredicted RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 BUD31P41223 144 aaPredicted RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 PCBP4P57723 403 aaKnown RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 RAB38P57729 211 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 TRA2BP62995 288 aaKnown RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 ERVK-8P63133 956 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF763Q0D2J5 394 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 SLAMF1Q13291 335 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 C6orf136Q5SQH8 315 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 NXNQ6DKJ4 435 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 NOXRED1Q6NXP6 359 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 EPGNQ6UW88 154 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF517Q6ZMY9 492 aaPredicted RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF793Q6ZN11 406 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 CACNA2D3Q8IZS8 1091 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 CA13Q8N1Q1 262 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 IL22RA1Q8N6P7 574 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 AMER3Q8N944 861 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 OR51Q1Q8NH59 317 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 CEP70Q8NHQ1 597 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 ACTRT2Q8TDY3 377 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 STON2Q8WXE9 905 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 RNF31Q96EP0 1072 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 MAELQ96JY0 434 aaKnown RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 OR1F2PQ96R84 312 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 FAIM2Q9BWQ8 316 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 SORBS1Q9BX66 1292 aaKnown RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 AKTIPQ9H8T0 292 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 WDR41Q9HAD4 459 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 C14orf105Q9NVL8 296 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 NOP53Q9NZM5 478 aaKnown RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 HCN3Q9P1Z3 774 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 NXT1Q9UKK6 140 aaKnown RBP12.46□□□□□ -0.41
TIMP1-202ENST00000377017 DAPP1Q9UN19 280 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 PADI2Q9Y2J8 665 aa12.46□□□□□ -0.41
TIMP1-202ENST00000377017 SEC16AO15027 2179 aa12.46□□□□□ -0.42
TIMP1-202ENST00000377017 FER1L5A0AVI2 2057 aa12.46□□□□□ -0.42
TIMP1-202ENST00000377017 A0A0G2JND7 137 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 TEX51A0A1B0GUA7 166 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 BLACEA4D250 179 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 C21orf140B9A014 251 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 ZNF195O14628 629 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 EEDO75530 441 aaKnown RBP12.45□□□□□ -0.42
TIMP1-202ENST00000377017 RAB40ALP0C0E4 278 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 FAM58BPP0C7Q3 252 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 PRR35P0CG20 571 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 PRPS2P11908 318 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 ITGAXP20702 1163 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 CPN2P22792 545 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 JAK1P23458 1154 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 TPP2P29144 1249 aaPredicted RBP12.45□□□□□ -0.42
TIMP1-202ENST00000377017 EPHA3P29320 983 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 STAT5AP42229 794 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 XCR1P46094 333 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 LIM2P55344 173 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 SNRPNP63162 240 aaKnown RBP12.45□□□□□ -0.42
TIMP1-202ENST00000377017 OLR1P78380 273 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 EMX2Q04743 252 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 COL9A2Q14055 689 aaPredicted RBP12.45□□□□□ -0.42
TIMP1-202ENST00000377017 KIAA0040Q15053 153 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 SLC9B1Q4ZJI4 515 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 RFTN2Q52LD8 501 aaPredicted RBP12.45□□□□□ -0.42
TIMP1-202ENST00000377017 VWA5B1Q5TIE3 1220 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 MLIPQ5VWP3 458 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 OGFOD2Q6N063 350 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 OVCH1Q7RTY7 1134 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 TIPARPQ7Z3E1 657 aaKnown RBP12.45□□□□□ -0.42
TIMP1-202ENST00000377017 MAVSQ7Z434 540 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 SPATA19Q7Z5L4 167 aa12.45□□□□□ -0.42
TIMP1-202ENST00000377017 CPLX4Q7Z7G2 160 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms