RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 GADD45GO95257 159 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 GASTP01350 101 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 URODP06132 367 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 CHMP24386 653 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 POU1F1P28069 291 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 CNR2P34972 360 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 BMPR1AP36894 532 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 OLR1P78380 273 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 SLC7A9P82251 487 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 HENMT1Q5T8I9 393 aaKnown RBP12.65□□□□□ -0.38
ACTN1-202ENST00000376839 CCDC190Q86UF4 302 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
ACTN1-202ENST00000376839 CACTIN-AS1Q8N1I8 211 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 EHD1Q9H4M9 534 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 TMEM38AQ9H6F2 299 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 ERVK13-1Q9NX77 482 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 SLC25A13Q9UJS0 675 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 CCL26Q9Y258 94 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 NINQ8N4C6 2090 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 SLC5A10A0PJK1 596 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 ZAR1LA6NP61 321 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 GPX5O75715 221 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 ITGA2P17301 1181 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 VIPR1P32241 457 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 SOAT1P35610 550 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 CHI3L1P36222 383 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-202ENST00000376839 PIK3CBP42338 1070 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 CDC42P60953 191 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 TBPL1P62380 186 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 IFITM2Q01629 132 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 SP3Q02447 781 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 C2orf80Q0P641 193 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 SLBPQ14493 270 aaKnown RBP eCLIP12.65□□□□□ -0.38
ACTN1-202ENST00000376839 LEXMQ3ZCV2 418 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 C19orf48Q6RUI8 117 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 PTCHD4Q6ZW05 846 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 CCDC80Q76M96 950 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 KLHDC8AQ8IYD2 350 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 WDR36Q8NI36 951 aaKnown RBP12.65□□□□□ -0.38
ACTN1-202ENST00000376839 ZNF480Q8WV37 535 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 PPCDCQ96CD2 204 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 WRAP53Q9BUR4 548 aaKnown RBP12.65□□□□□ -0.38
ACTN1-202ENST00000376839 CDCA4Q9BXL8 241 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 NUAK2Q9H093 628 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 SPNS1Q9H2V7 528 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 NMNAT1Q9HAN9 279 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-202ENST00000376839 KCNE2Q9Y6J6 123 aa12.65□□□□□ -0.38
ACTN1-202ENST00000376839 TRBC2A0A5B9 178 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 PLK4O00444 970 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 GRM6O15303 877 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 TEX28O15482 410 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 DYRK3O43781 588 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 PQBP1O60828 265 aaKnown RBP12.64□□□□□ -0.39
ACTN1-202ENST00000376839 GPR37L1O60883 481 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 PCBP3P57721 371 aaKnown RBP12.64□□□□□ -0.39
ACTN1-202ENST00000376839 TAS2R50P59544 299 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 PCDH1Q08174 1060 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 RBBP4Q09028 425 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 DUSP7Q16829 419 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 CRB2Q5IJ48 1285 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 SPANXN2Q5MJ10 180 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 OXR1Q8N573 874 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 C16orf78Q8WTQ4 265 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 CXorf40BQ96DE9 158 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 VPS35Q96QK1 796 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 IL4I1Q96RQ9 567 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 MTG2Q9H4K7 406 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 C11orf16Q9NQ32 467 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 KLHL3Q9UH77 587 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 MAPRE3Q9UPY8 281 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 ENPP4Q9Y6X5 453 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 EFCAB10A6NFE3 127 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 A8MVJ9 347 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 LEFTY1O75610 366 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 INHAP05111 366 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 IGFBP1P08833 259 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-202ENST00000376839 ZNF30P17039 623 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 FEN1P39748 380 aaKnown RBP12.64□□□□□ -0.39
ACTN1-202ENST00000376839 ETV6P41212 452 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 POLR2LP62875 67 aaKnown RBP12.64□□□□□ -0.39
ACTN1-202ENST00000376839 PDE7AQ13946 482 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 STARD3Q14849 445 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 TMC8Q8IU68 726 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 SLC39A11Q8N1S5 342 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 TRAM1L1Q8N609 369 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 IL17RDQ8NFM7 739 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 BTN2A2Q8WVV5 523 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 SORCS1Q8WY21 1168 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 OPALINQ96PE5 141 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 YIPF2Q9BWQ6 316 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 DMRT3Q9NQL9 472 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 GULP1Q9UBP9 304 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 PLXNA2O75051 1894 aa12.64□□□□□ -0.39
ACTN1-202ENST00000376839 MN1Q10571 1320 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 TRBV4-1A0A0J9YWV2 114 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 NEDD8-MDP1E9PL57 170 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 H3BM21 787 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 CCRL2O00421 344 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 FFAR1O14842 300 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms