RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 PRDM7Q9NQW5 492 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 DCAF13Q9NV06 445 aaKnown RBP16.82■□□□□ 0.28
CTTN-203ENST00000376561 ENTPD2Q9Y5L3 495 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 USP34Q70CQ2 3546 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 C2orf74A8MZ97 194 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 B4DGG1 531 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 MT-ND1P03886 318 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 RAP2AP10114 183 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 RGNQ15493 299 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 ADRM1Q16186 407 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 PRPF38BQ5VTL8 546 aaKnown RBP16.82■□□□□ 0.28
CTTN-203ENST00000376561 FBXO42Q6P3S6 717 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 ERICH5Q6P6B1 374 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 TRIM40Q6P9F5 258 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 ENPP6Q6UWR7 440 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 TMEM26Q6ZUK4 368 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 PTOV1Q86YD1 416 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTTN-203ENST00000376561 GALNT4Q8N4A0 578 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 TRIML2Q8N7C3 387 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 SRFBP1Q8NEF9 429 aaKnown RBP16.82■□□□□ 0.28
CTTN-203ENST00000376561 CENPNQ96H22 339 aaPredicted RBP16.82■□□□□ 0.28
CTTN-203ENST00000376561 SLC35A5Q9BS91 424 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 CHST8Q9H2A9 424 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 TM9SF3Q9HD45 589 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 EML5Q05BV3 1969 aa16.82■□□□□ 0.28
CTTN-203ENST00000376561 K7ESF4 209 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 FAM58BPP0C7Q3 252 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 UQCRBP14927 111 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 CKMT2P17540 419 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 HIST1H1TP22492 207 aaPredicted RBP16.81■□□□□ 0.28
CTTN-203ENST00000376561 CCT8P50990 548 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 STXBP1P61764 594 aaKnown RBP16.81■□□□□ 0.28
CTTN-203ENST00000376561 CHRNB3Q05901 458 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 FCRL6Q6DN72 434 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 FIGLAQ6QHK4 219 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 SPESP1Q6UW49 350 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 ZNF761Q86XN6 746 aaPredicted RBP16.81■□□□□ 0.28
CTTN-203ENST00000376561 NATD1Q8N6N6 113 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 ACOT4Q8N9L9 421 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 OR8K5Q8NH50 307 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 ZNF764Q96H86 408 aaPredicted RBP16.81■□□□□ 0.28
CTTN-203ENST00000376561 DPH2Q9BQC3 489 aaPredicted RBP16.81■□□□□ 0.28
CTTN-203ENST00000376561 TRIM4Q9C037 500 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 HRASLS2Q9NWW9 162 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 C5AR2Q9P296 337 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 AK5Q9Y6K8 562 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 CTSVO60911 334 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 SERPINA1P01009 418 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 DDX5P17844 614 aaKnown RBP16.81■□□□□ 0.28
CTTN-203ENST00000376561 BCKDHBP21953 392 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 ATP5A1P25705 553 aaKnown RBP16.81■□□□□ 0.28
CTTN-203ENST00000376561 SLC9A5Q14940 896 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 ELOCQ15369 112 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTTN-203ENST00000376561 SLC36A4Q6YBV0 504 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 RBM12BQ8IXT5 1001 aaKnown RBP16.81■□□□□ 0.28
CTTN-203ENST00000376561 SPATA9Q9BWV2 254 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 SLAMF7Q9NQ25 335 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 GPATCH2Q9NW75 528 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 ANKMY1Q9P2S6 941 aa16.81■□□□□ 0.28
CTTN-203ENST00000376561 COL6A3P12111 3177 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 PRKD3O94806 890 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 TSFMP43897 325 aaKnown RBP16.8■□□□□ 0.28
CTTN-203ENST00000376561 MVDP53602 400 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 RAB8AP61006 207 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 SLAMF1Q13291 335 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 C16orf72Q14CZ0 275 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 ATP6AP1Q15904 470 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 NKG7Q16617 165 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 NRF1Q16656 503 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 SLC5A12Q1EHB4 618 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 NDUFAF5Q5TEU4 345 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 ASPGQ86U10 573 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 ZCCHC7Q8N3Z6 543 aaKnown RBP16.8■□□□□ 0.28
CTTN-203ENST00000376561 C1orf216Q8TAB5 229 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 OR2A5Q96R48 311 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 SLC29A1Q99808 456 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 OLAHQ9NV23 265 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 KLK4Q9Y5K2 254 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 PDPK1O15530 556 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 NUDT7P0C024 238 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 DRD2P14416 443 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 LSSP48449 732 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 PCBP4P57723 403 aaKnown RBP16.8■□□□□ 0.28
CTTN-203ENST00000376561 RGS1Q08116 209 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 MRM1Q6IN84 353 aaKnown RBP16.8■□□□□ 0.28
CTTN-203ENST00000376561 ANGPTL8Q6UXH0 198 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 ZBTB49Q6ZSB9 765 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 TMEFF1Q8IYR6 380 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 KCT2Q8NC54 265 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 MAFAQ8NHW3 353 aaPredicted RBP16.8■□□□□ 0.28
CTTN-203ENST00000376561 NT5CQ8TCD5 201 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 UCN3Q969E3 161 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 EXOSC8Q96B26 276 aaKnown RBP16.8■□□□□ 0.28
CTTN-203ENST00000376561 KLHL25Q9H0H3 589 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 EVA1BQ9NVM1 165 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 PILRAQ9UKJ1 303 aa16.8■□□□□ 0.28
CTTN-203ENST00000376561 ACSL6Q9UKU0 697 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms