RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 AP1M2Q9Y6Q5 423 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 CEP192Q8TEP8 1941 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 FAM220BPB1ANY3 271 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 K7ESF4 209 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 TLR4O00206 839 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 SOCS2O14508 198 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 GPR37L1O60883 481 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 CRATP43155 626 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 CXCL12P48061 93 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 PPM1FP49593 454 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-206ENST00000376496 IST1P53990 364 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 SLAMF1Q13291 335 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 GK3PQ14409 553 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 DEFB133Q30KQ1 61 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 C6orf52Q5T4I8 152 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 C18orf63Q68DL7 685 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 MSANTD1Q6ZTZ1 278 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 EPHX4Q8IUS5 362 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLCN6-206ENST00000376496 ZZZ3Q8IYH5 903 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 STARD8Q92502 1023 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 NECAB3Q96P71 396 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-206ENST00000376496 NELL2Q99435 816 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 PRDM7Q9NQW5 492 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 AGPAT4Q9NRZ5 378 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 UCKL1Q9NWZ5 548 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 ATG4BQ9Y4P1 393 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 MAGED1Q9Y5V3 778 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-206ENST00000376496 FRYLO94915 3013 aa11.98□□□□□ -0.49
CLCN6-206ENST00000376496 A0A0A6YYD5 115 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 C7orf72A4D263 438 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 RNASET2O00584 256 aaKnown RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 PGRMC2O15173 223 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 KDM1AO60341 852 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ZNF682O95780 498 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 GPIP06744 558 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 C8orf89P0DMQ9 161 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 DDCP20711 480 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 BTN3A2P78410 334 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ABHD18Q0P651 414 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 DEFB110Q30KQ9 67 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 NDUFAF5Q5TEU4 345 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ABHD17CQ6PCB6 329 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 FIGLAQ6QHK4 219 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 PAGE2Q7Z2X7 111 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 R3HCC1LQ7Z5L2 792 aaKnown RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ACOT4Q8N9L9 421 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 FAM47BQ8NA70 645 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 MFSD9Q8NBP5 474 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 MUC13Q9H3R2 512 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 CXorf36Q9H7Y0 433 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ATAD3AQ9NVI7 634 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 OAZ3Q9UMX2 235 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 MRPS2Q9Y399 296 aaKnown RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ZDBF2Q9HCK1 2354 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 DMDP11532 3685 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ZNF860A6NHJ4 632 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 CASC3O15234 703 aaKnown RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 FAM58BPP0C7Q3 252 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ZNF888P0CJ79 500 aaPredicted RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 MYF5P13349 255 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ZNF26P17031 533 aaPredicted RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 GPX2P18283 190 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 FASP25445 335 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 OLR1P78380 273 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 SLC5A12Q1EHB4 618 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 RNF130Q86XS8 419 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 MFSD2AQ8NA29 543 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 REXO5Q96IC2 774 aaKnown RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 VPS50Q96JG6 964 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 MAGED4Q96JG8 741 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 DDX31Q9H8H2 851 aaKnown RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 IL21RQ9HBE5 538 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 HNRNPRO43390 633 aaKnown RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 NME6O75414 186 aaPredicted RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 FOLH1Q04609 750 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 KIR2DS3Q14952 304 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 RGNQ15493 299 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 PUS10Q3MIT2 529 aaKnown RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 SWT1Q5T5J6 900 aaKnown RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 PRSS41Q7RTY9 318 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 GPR155Q7Z3F1 870 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 CBR4Q8N4T8 237 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 ADCY4Q8NFM4 1077 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 DNAJB8Q8NHS0 232 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 CLDN23Q96B33 292 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 OTUB1Q96FW1 271 aaPredicted RBP11.97□□□□□ -0.49
CLCN6-206ENST00000376496 VCX3BQ9H321 246 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 POT1Q9NUX5 634 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 DOLKQ9UPQ8 538 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 LRCH1Q9Y2L9 728 aa11.97□□□□□ -0.49
CLCN6-206ENST00000376496 MYOCOSA0A1B0GUC4 107 aa11.96□□□□□ -0.49
CLCN6-206ENST00000376496 A0A1W2PR48 441 aa11.96□□□□□ -0.49
CLCN6-206ENST00000376496 ERAL1O75616 437 aaKnown RBP11.96□□□□□ -0.49
CLCN6-206ENST00000376496 CCNDBP1O95273 360 aa11.96□□□□□ -0.49
CLCN6-206ENST00000376496 CSF2P04141 144 aa11.96□□□□□ -0.49
CLCN6-206ENST00000376496 IL1RNP18510 177 aa11.96□□□□□ -0.49
CLCN6-206ENST00000376496 HIST1H1TP22492 207 aaPredicted RBP11.96□□□□□ -0.49
CLCN6-206ENST00000376496 ATP5A1P25705 553 aaKnown RBP11.96□□□□□ -0.49
CLCN6-206ENST00000376496 CHI3L1P36222 383 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms