RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 BCL9LQ86UU0 1499 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 VSTM5A8MXK1 200 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 VILLO15195 856 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 MLLT3P42568 568 aaPredicted RBP9.5□□□□□ -0.89
SPEN-201ENST00000375759 TMEM53Q6P2H8 277 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 FAM198BQ6UWH4 519 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 DENND1AQ8TEH3 1009 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 RPL10LQ96L21 214 aaKnown RBP9.5□□□□□ -0.89
SPEN-201ENST00000375759 MUS81Q96NY9 551 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 BCL7BQ9BQE9 202 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 HERC2P3Q9BVR0 1158 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 CD244Q9BZW8 370 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 ARL6Q9H0F7 186 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 ATG5Q9H1Y0 275 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 GALPQ9UBC7 116 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 BLOC1S5-TXNDC5H3BN57 136 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 SMAD9O15198 467 aaKnown RBP9.5□□□□□ -0.89
SPEN-201ENST00000375759 RGS9O75916 674 aaPredicted RBP9.5□□□□□ -0.89
SPEN-201ENST00000375759 UQCRC2P22695 453 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 PRKXP51817 358 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 HS3ST5Q8IZT8 346 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 PLA2G15Q8NCC3 412 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 PPP1R11O60927 126 aaPredicted RBP9.5□□□□□ -0.89
SPEN-201ENST00000375759 GP1BBP13224 206 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 CHRNA4P43681 627 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 IRF5Q13568 498 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 UGT2A3Q6UWM9 527 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 C12orf40Q86WS4 652 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 ITPKCQ96DU7 683 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 SYT4Q9H2B2 425 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 PARPBPQ9NWS1 579 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 ANKRD66B4E2M5 251 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 FAAHO00519 579 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 SNTA1Q13424 505 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 LRRC37A5PQ49AS3 106 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 TMEM236Q5W0B7 351 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 NANOGP8Q6NSW7 305 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 ZSCAN4Q8NAM6 433 aaPredicted RBP9.5□□□□□ -0.89
SPEN-201ENST00000375759 BEX2Q9BXY8 128 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 NANOGQ9H9S0 305 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 BEX1Q9HBH7 125 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 APOBEC3GQ9HC16 384 aaKnown RBP9.5□□□□□ -0.89
SPEN-201ENST00000375759 CCM2LQ9NUG4 571 aaPredicted RBP9.5□□□□□ -0.89
SPEN-201ENST00000375759 CPQQ9Y646 472 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 GPR89AB7ZAQ6 455 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 SLC31A1O15431 190 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 LRRTM2O43300 516 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 DIRAS1O95057 198 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 GPR89BP0CG08 455 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 CFL1P23528 166 aaKnown RBP9.5□□□□□ -0.89
SPEN-201ENST00000375759 UQCRC1P31930 480 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 SPANXN4Q5MJ08 99 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 C6orf141Q5SZD1 244 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 HSD3B7Q9H2F3 369 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 MAGIXQ9H6Y5 334 aa9.5□□□□□ -0.89
SPEN-201ENST00000375759 A0A1B0GVT2 93 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 IFNA5P01569 189 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 ZNF16P17020 682 aaPredicted RBP9.49□□□□□ -0.89
SPEN-201ENST00000375759 GSTM2P28161 218 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 SLC10A6Q3KNW5 377 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 C6orf89Q6UWU4 347 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CCBE1Q6UXH8 406 aaPredicted RBP9.49□□□□□ -0.89
SPEN-201ENST00000375759 BEND4Q6ZU67 534 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 ZNF550Q7Z398 422 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 FBXO22Q8NEZ5 403 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 SLC5A11Q8WWX8 675 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 DOHHQ9BU89 302 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 IFNA4P05014 189 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 FKBP1BP68106 108 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 PPP1R8Q12972 351 aaKnown RBP9.49□□□□□ -0.89
SPEN-201ENST00000375759 ADGRF1Q5T601 910 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 MTFR2Q6P444 385 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 C2CD4AQ8NCU7 369 aaPredicted RBP9.49□□□□□ -0.89
SPEN-201ENST00000375759 SMPDL3AQ92484 453 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CELP19835 753 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 TMIGD1Q6UXZ0 262 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 IFT172Q9UG01 1749 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 PAK4O96013 591 aaPredicted RBP9.49□□□□□ -0.89
SPEN-201ENST00000375759 IL1R2P27930 398 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CDKN2CP42773 168 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 GRIK5Q16478 980 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 RABL3Q5HYI8 236 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 COMTD1Q86VU5 262 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 TOR1AIP2Q8NFQ8 470 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 NLGN2Q8NFZ4 835 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 LRCH3Q96II8 777 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 A0A096LPI6 279 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 PLATP00750 562 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 ZNF30P17039 623 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CDK2P24941 298 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 CSKP41240 450 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 DPY19L3Q6ZPD9 716 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 SLA2Q9H6Q3 261 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 SOBPA7XYQ1 873 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 PTPN2P17706 415 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 ALDH3B2P48448 385 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 SLC25A11Q02978 314 aaKnown RBP9.49□□□□□ -0.89
SPEN-201ENST00000375759 UAP1L1Q3KQV9 507 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 NPAS4Q8IUM7 802 aa9.49□□□□□ -0.89
SPEN-201ENST00000375759 ZNF382Q96SR6 550 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms