RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 HTR3DQ70Z44 454 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 PLCZ1Q86YW0 608 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 C7orf61Q8IZ16 206 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 VOPP1Q96AW1 172 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 MTFMTQ96DP5 389 aaKnown RBP12.4□□□□□ -0.42
MSH5-204ENST00000375755 OMA1Q96E52 524 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 TRMT61AQ96FX7 289 aaKnown RBP12.4□□□□□ -0.42
MSH5-204ENST00000375755 TPD52L3Q96J77 140 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 DPH2Q9BQC3 489 aaPredicted RBP12.4□□□□□ -0.42
MSH5-204ENST00000375755 ELOVL2Q9NXB9 296 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 MS4A12Q9NXJ0 267 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 TEKT2Q9UIF3 430 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 RPS6KA6Q9UK32 745 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 PPT2Q9UMR5 302 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 TRAV19A0A0A6YYK7 116 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 SLC28A1O00337 649 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 GRM6O15303 877 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 TAPBPO15533 448 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 SCO1O75880 301 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 POLR2CP19387 275 aaPredicted RBP12.4□□□□□ -0.42
MSH5-204ENST00000375755 KIR2DL3P43628 341 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 PSPHP78330 225 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 BNC1Q01954 994 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 TIMM50Q3ZCQ8 353 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 SBSNQ6UWP8 590 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 CBLL1Q75N03 491 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 EIF3MQ7L2H7 374 aaKnown RBP12.4□□□□□ -0.42
MSH5-204ENST00000375755 MRPL43Q8N983 215 aaKnown RBP12.4□□□□□ -0.42
MSH5-204ENST00000375755 SPPL3Q8TCT6 385 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 C7orf34Q96L11 122 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 CCM2Q9BSQ5 444 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 CERS4Q9HA82 394 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 SNTG1Q9NSN8 517 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 RLIMQ9NVW2 624 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 RIMKLBQ9ULI2 386 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 TNPO3Q9Y5L0 923 aaKnown RBP12.4□□□□□ -0.42
MSH5-204ENST00000375755 EFCAB14O75071 495 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 ULK1O75385 1050 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 KCNK5O95279 499 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 CSF3P09919 207 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 RPS14P62263 151 aaKnown RBP12.39□□□□□ -0.43
MSH5-204ENST00000375755 SLC7A9P82251 487 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 TNK1Q13470 666 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 TAF1AQ15573 450 aaPredicted RBP12.39□□□□□ -0.43
MSH5-204ENST00000375755 ZRANB3Q5FWF4 1079 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 LAMTOR1Q6IAA8 161 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 SLC51BQ86UW2 128 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 FAM217AQ8IXS0 508 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 NLGN4YQ8NFZ3 816 aaPredicted RBP12.39□□□□□ -0.43
MSH5-204ENST00000375755 DNAJB8Q8NHS0 232 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 UTP15Q8TED0 518 aaKnown RBP12.39□□□□□ -0.43
MSH5-204ENST00000375755 TSSK3Q96PN8 268 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 ABCG8Q9H221 673 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 PCDHGA2Q9Y5H1 932 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 MYO9BQ13459 2157 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 SMLR1H3BR10 107 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 TACR1P25103 407 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 MADCAM1Q13477 382 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 EIF4HQ15056 248 aaKnown RBP12.39□□□□□ -0.43
MSH5-204ENST00000375755 TOR2AQ5JU69 321 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 SLC35F1Q5T1Q4 408 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 FAM205BPQ63HN1 556 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 CCDC149Q6ZUS6 474 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 AMIGO1Q86WK6 493 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 PTOV1Q86YD1 416 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 SLC5A8Q8N695 610 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 EPYCQ99645 322 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 TAPBPLQ9BX59 468 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 HDHD5Q9BXW7 423 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 FAM83DQ9H4H8 585 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 ASIC5Q9NY37 505 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 LSM7Q9UK45 103 aaKnown RBP12.39□□□□□ -0.43
MSH5-204ENST00000375755 HELZP42694 1942 aaKnown RBP12.39□□□□□ -0.43
MSH5-204ENST00000375755 E5RI56 91 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 NEDD8-MDP1E9PL57 170 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 RFXANKO14593 260 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 FFAR2O15552 330 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 FZD6O60353 706 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 OR2B3O76000 313 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 LRATO95237 230 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 DMC1Q14565 340 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 GLYR1Q49A26 553 aaPredicted RBP12.39□□□□□ -0.43
MSH5-204ENST00000375755 FAM131AQ6UXB0 335 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 TRIM46Q7Z4K8 759 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 PMEPA1Q969W9 287 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 WDFY2Q96P53 400 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 OPALINQ96PE5 141 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 MCOLN1Q9GZU1 580 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 C12orf10Q9HB07 376 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 UCKL1Q9NWZ5 548 aa12.39□□□□□ -0.43
MSH5-204ENST00000375755 SLC35F4A4IF30 521 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 C2orf81A6NN90 581 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 MANBAO00462 879 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 PLA2G10O15496 165 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 PSKH1P11801 424 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 POU3F3P20264 500 aaPredicted RBP12.38□□□□□ -0.43
MSH5-204ENST00000375755 LPOP22079 712 aaPredicted RBP12.38□□□□□ -0.43
MSH5-204ENST00000375755 HLA-DMAP28067 261 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms