RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CLVS2Q5SYC1 327 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 TAC4Q86UU9 113 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF584Q8IVC4 421 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 OR1J4Q8NGS1 313 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 PCDHGA7Q9Y5G6 932 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CDKN2CP42773 168 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 AVPR1BP47901 424 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 BLKP51451 505 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 LRRC56Q8IYG6 542 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 FTMTQ8N4E7 242 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 P2RX7Q99572 595 aaKnown RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 RGCCQ9H4X1 137 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 PDHXO00330 501 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF208O43345 1280 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 FCER2P06734 321 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 LAG3P18627 525 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CCINQ13939 588 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 DHCR24Q15392 516 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 KCNC2Q96PR1 638 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 TSSK6Q9BXA6 273 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ELL3Q9HB65 397 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 C1QTNF8P60827 252 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 MPP2Q14168 576 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 PRAMEF13Q5VWM6 474 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 EEF1DP3Q658K8 133 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 LPCAT3Q6P1A2 487 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 OR6Q1Q8NGQ2 317 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 OR2L2Q8NH16 312 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ADAMTS14Q8WXS8 1223 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 UBR2Q8IWV8 1755 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ADGRF1Q5T601 910 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 BMFQ96LC9 184 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 LHPPQ9H008 270 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 XPNPEP1Q9NQW7 623 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 HAS3O00219 553 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ELK4P28324 431 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 UFM1P61960 85 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 BEST3Q8N1M1 668 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 OR56B4Q8NH76 319 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 IMP4Q96G21 291 aaKnown RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 COQ10AQ96MF6 247 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 FERD3LQ96RJ6 166 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 HEPHQ9BQS7 1158 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SDHAF3Q9NRP4 125 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PDYNP01213 254 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 HLA-DQB2P05538 268 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 VEGFAP15692 232 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 NCBP2P52298 156 aaKnown RBP eCLIP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ZBTB46Q86UZ6 589 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SYT14Q8NB59 555 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 EXOSC8Q96B26 276 aaKnown RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 S100PBPQ96BU1 408 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 CACNG6Q9BXT2 260 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ABRACLQ9P1F3 81 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 A0A0D9SG52 128 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 BCAS1O75363 584 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 GLUD1P00367 558 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 S1PR1P21453 382 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PRKACBP22694 351 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ITGA3P26006 1051 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 RBMXP38159 391 aaKnown RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 FRKP42685 505 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 MTNR1AP48039 350 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 CDKL1Q00532 357 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 HSPB3Q12988 150 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SIX1Q15475 284 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SLC10A6Q3KNW5 377 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PLAG1Q6DJT9 500 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 RFPL4BQ6ZWI9 263 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 DCUN1D3Q8IWE4 304 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 TXNDC5Q8NBS9 432 aaKnown RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 FAM170BA6NMN3 283 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 CTSEP14091 401 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PFKLP17858 780 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 TAF10Q12962 218 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 TOR1AIP1Q5JTV8 583 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 UBAP2Q5T6F2 1119 aaKnown RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 C12orf40Q86WS4 652 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 OR7G2Q8NG99 324 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 TERB2Q8NHR7 220 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PSMG2Q969U7 264 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 CDC14AQ9UNH5 594 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 CICQ96RK0 1608 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 B4GALT5O43286 388 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 TPT1P13693 172 aaKnown RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 GPR143P51810 404 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 MLLT11Q13015 90 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PAN2Q504Q3 1202 aaKnown RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SIRPB2Q5JXA9 342 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 DPY19L2P1Q6NXN4 242 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SLC30A6Q6NXT4 461 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PQLC3Q8N755 202 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SLC5A11Q8WWX8 675 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PIGVQ9NUD9 493 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ACOT7O00154 380 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SOCS2O14508 198 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SLC35E2BP0CK96 405 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 CLUP10909 449 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 CRHBPP24387 322 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 BMXP51813 675 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms