RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 TRUB1Q8WWH5 349 aaKnown RBP17.48■□□□□ 0.39
RXRB-202ENST00000374685 UCN3Q969E3 161 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 INSM2Q96T92 566 aaPredicted RBP17.48■□□□□ 0.39
RXRB-202ENST00000374685 KIF17Q9P2E2 1029 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 CCDC88CQ9P219 2028 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 SERTM1A2A2V5 107 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 NPIPB8E9PQR5 432 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 FURINP09958 794 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 HOXB3P14651 431 aaPredicted RBP17.48■□□□□ 0.39
RXRB-202ENST00000374685 IGFBP5P24593 272 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 CPZQ66K79 652 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 R3HCC1LQ7Z5L2 792 aaKnown RBP17.48■□□□□ 0.39
RXRB-202ENST00000374685 KRT78Q8N1N4 520 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 NFKBIDQ8NI38 313 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 EXOSC8Q96B26 276 aaKnown RBP17.48■□□□□ 0.39
RXRB-202ENST00000374685 SLC6A16Q9GZN6 736 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 TRIT1Q9H3H1 467 aaKnown RBP17.48■□□□□ 0.39
RXRB-202ENST00000374685 TESMINQ9Y4I5 508 aa17.48■□□□□ 0.39
RXRB-202ENST00000374685 HEATR5BQ9P2D3 2071 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 GLOD5A6NK44 160 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 PLPP1O14494 284 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 EPHA2P29317 976 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 HOXD11P31277 338 aaPredicted RBP17.47■□□□□ 0.39
RXRB-202ENST00000374685 BMXP51813 675 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 HSPB3Q12988 150 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 SLC5A12Q1EHB4 618 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 METRNLQ641Q3 311 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 NUDT18Q6ZVK8 323 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 THAP5Q7Z6K1 395 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 CYP4Z1Q86W10 505 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 LAS2Q8IYD9 372 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 LINC01555Q8NAE3 123 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 FBXO15Q8NCQ5 510 aaPredicted RBP17.47■□□□□ 0.39
RXRB-202ENST00000374685 MAGED4Q96JG8 741 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 NAA50Q9GZZ1 169 aaKnown RBP17.47■□□□□ 0.39
RXRB-202ENST00000374685 RSPH9Q9H1X1 276 aaPredicted RBP17.47■□□□□ 0.39
RXRB-202ENST00000374685 PRDM8Q9NQV8 689 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 GPATCH2Q9NW75 528 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 SNX11Q9Y5W9 270 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 C1orf226A1L170 272 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 POU2F2P09086 479 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 NR4A1P22736 598 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 MAPK12P53778 367 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 CTU2Q2VPK5 515 aaKnown RBP17.47■□□□□ 0.39
RXRB-202ENST00000374685 UNC5DQ6UXZ4 953 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 USP51Q70EK9 711 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 DCP2Q8IU60 420 aaKnown RBP17.47■□□□□ 0.39
RXRB-202ENST00000374685 OTUB1Q96FW1 271 aaPredicted RBP17.47■□□□□ 0.39
RXRB-202ENST00000374685 NDEL1Q9GZM8 345 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 IL1RAPQ9NPH3 570 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 C8orf4Q9NR00 106 aa17.47■□□□□ 0.39
RXRB-202ENST00000374685 LOC100130705A0A1B0GUX0 176 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 A0A1W2PRB8 838 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 KRBA1A5PL33 1030 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 H0Y8X5 98 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 XPNPEP2O43895 674 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 KLHL18O94889 574 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 C7P10643 843 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 KCNJ8Q15842 424 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 TNFAIP8L2Q6P589 184 aaPredicted RBP17.46■□□□□ 0.39
RXRB-202ENST00000374685 SVOPLQ8N434 492 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 AMER3Q8N944 861 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 PSD2Q9BQI7 771 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 FANCEQ9HB96 536 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 C3orf18Q9UK00 162 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 RPS6KA6Q9UK32 745 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 KIAA1549LQ6ZVL6 1849 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 K7EQS6 105 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 KMOO15229 486 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 SUV39H1O43463 412 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 PRKRAO75569 313 aaKnown RBP17.46■□□□□ 0.39
RXRB-202ENST00000374685 ARHGDIAP52565 204 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 CRYBA2P53672 197 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 CD47Q08722 323 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 NR1D2Q14995 579 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 ANKRD54Q6NXT1 300 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 MSANTD1Q6ZTZ1 278 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 PARP8Q8N3A8 854 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 C11orf65Q8NCR3 313 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 COQ8BQ96D53 544 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 NPLQ9BXD5 320 aaPredicted RBP17.46■□□□□ 0.39
RXRB-202ENST00000374685 DGCR6LQ9BY27 220 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 CXorf21Q9HAI6 301 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 PHPT1Q9NRX4 125 aaPredicted RBP17.46■□□□□ 0.39
RXRB-202ENST00000374685 RASSF1Q9NS23 344 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 DZANK1Q9NVP4 752 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 MSRAQ9UJ68 235 aa17.46■□□□□ 0.39
RXRB-202ENST00000374685 H3BMQ9 156 aa17.45■□□□□ 0.38
RXRB-202ENST00000374685 FOXE1O00358 373 aaPredicted RBP17.45■□□□□ 0.38
RXRB-202ENST00000374685 LCMT2O60294 686 aaKnown RBP17.45■□□□□ 0.38
RXRB-202ENST00000374685 DNTTP04053 509 aa17.45■□□□□ 0.38
RXRB-202ENST00000374685 ALPPL2P10696 532 aa17.45■□□□□ 0.38
RXRB-202ENST00000374685 C5AR1P21730 350 aa17.45■□□□□ 0.38
RXRB-202ENST00000374685 PTX3P26022 381 aaPredicted RBP17.45■□□□□ 0.38
RXRB-202ENST00000374685 ZNF33BQ06732 778 aa17.45■□□□□ 0.38
RXRB-202ENST00000374685 RAPSNQ13702 412 aa17.45■□□□□ 0.38
RXRB-202ENST00000374685 RAB39AQ14964 217 aa17.45■□□□□ 0.38
RXRB-202ENST00000374685 CLCA4Q14CN2 919 aa17.45■□□□□ 0.38
RXRB-202ENST00000374685 MLF2Q15773 248 aaPredicted RBP17.45■□□□□ 0.38
RXRB-202ENST00000374685 TTC23Q5W5X9 447 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms