RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 CBR4Q8N4T8 237 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 DEFB123Q8N688 67 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 OR8K5Q8NH50 307 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 EXOSC8Q96B26 276 aaKnown RBP16.07■□□□□ 0.16
PTPN20-203ENST00000374342 FCRL4Q96PJ5 515 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 NR1H4Q96RI1 486 aaPredicted RBP16.07■□□□□ 0.16
PTPN20-203ENST00000374342 NELL2Q99435 816 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 CHST8Q9H2A9 424 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 YY1AP1Q9H869 796 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 TAS2R9Q9NYW1 312 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 GOLGA4Q13439 2230 aaKnown RBP16.07■□□□□ 0.16
PTPN20-203ENST00000374342 WNT1P04628 370 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 MAOBP27338 520 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 CHI3L1P36222 383 aaPredicted RBP16.07■□□□□ 0.16
PTPN20-203ENST00000374342 CASP9P55211 416 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 RPS15AP62244 130 aaKnown RBP16.07■□□□□ 0.16
PTPN20-203ENST00000374342 TRIM40Q6P9F5 258 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 OR2L5Q8NG80 312 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 FAM174AQ8TBP5 190 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 ZNF597Q96LX8 424 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 KCNC2Q96PR1 638 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 C9orf16Q9BUW7 83 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 SPATA9Q9BWV2 254 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 TMEM121BQ9BXQ6 578 aaPredicted RBP16.07■□□□□ 0.16
PTPN20-203ENST00000374342 KLHL25Q9H0H3 589 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 CHRDQ9H2X0 955 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 OLAHQ9NV23 265 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 RAPGEFL1Q9UHV5 662 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 UTS2RQ9UKP6 389 aa16.07■□□□□ 0.16
PTPN20-203ENST00000374342 OR5K4A6NMS3 321 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 METTL12A8MUP2 240 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 ZNF682O95780 498 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 FAM58BPP0C7Q3 252 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 CERS1P27544 350 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 CD38P28907 300 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 CRATP43155 626 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 TRA2BP62995 288 aaKnown RBP16.06■□□□□ 0.16
PTPN20-203ENST00000374342 C16orf72Q14CZ0 275 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 ADRM1Q16186 407 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 COX20Q5RI15 118 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 INTS11Q5TA45 600 aaKnown RBP16.06■□□□□ 0.16
PTPN20-203ENST00000374342 ABHD17CQ6PCB6 329 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 VN1R4Q7Z5H5 301 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 SPEM1Q8N4L4 309 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 FAM46DQ8NEK8 389 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 OR10Q1Q8NGQ4 319 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 ZDHHC1Q8WTX9 485 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 ZFPM2Q8WW38 1151 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 MIR1-1HGQ9H1L0 117 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 SLAMF7Q9NQ25 335 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 SNX8Q9Y5X2 465 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 GMEB1Q9Y692 573 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 C7orf72A4D263 438 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 OR2A25A4D2G3 310 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 H0YJX3 145 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 CLOCKO15516 846 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 TBX19O60806 448 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 DEAF1O75398 565 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-203ENST00000374342 ZNF23P17027 643 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 DDX5P17844 614 aaKnown RBP16.06■□□□□ 0.16
PTPN20-203ENST00000374342 RAB8AP61006 207 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 STXBP1P61764 594 aaKnown RBP16.06■□□□□ 0.16
PTPN20-203ENST00000374342 MLLT1Q03111 559 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-203ENST00000374342 BLMHQ13867 455 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 PDK3Q15120 406 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 TMTC4Q5T4D3 741 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 PPP4R4Q6NUP7 873 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 ASPGQ86U10 573 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 GJD3Q8N144 294 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 PJA1Q8NG27 643 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 MAL2Q969L2 176 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 CNBD2Q96M20 576 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 HSPA12BQ96MM6 686 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 BDH2Q9BUT1 245 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 TRIM4Q9C037 500 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 TWSG1Q9GZX9 223 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 FAF1Q9UNN5 650 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-203ENST00000374342 SAMD4AQ9UPU9 718 aaKnown RBP16.06■□□□□ 0.16
PTPN20-203ENST00000374342 PCDHGA2Q9Y5H1 932 aa16.06■□□□□ 0.16
PTPN20-203ENST00000374342 C2orf74A8MZ97 194 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 DENRO43583 198 aaKnown RBP16.05■□□□□ 0.16
PTPN20-203ENST00000374342 PRKRAO75569 313 aaKnown RBP16.05■□□□□ 0.16
PTPN20-203ENST00000374342 ETFAP13804 333 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 HIST1H1TP22492 207 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-203ENST00000374342 ATP5A1P25705 553 aaKnown RBP16.05■□□□□ 0.16
PTPN20-203ENST00000374342 PCGF2P35227 344 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 MVDP53602 400 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 MRPS35P82673 323 aaKnown RBP16.05■□□□□ 0.16
PTPN20-203ENST00000374342 HHEXQ03014 270 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 RGS1Q08116 209 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 HSPB3Q12988 150 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 SLC9A5Q14940 896 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 NDUFAF5Q5TEU4 345 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 SPESP1Q6UW49 350 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 DCP2Q8IU60 420 aaKnown RBP16.05■□□□□ 0.16
PTPN20-203ENST00000374342 PACRGLQ8N7B6 248 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 ACOT4Q8N9L9 421 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 MFSD2AQ8NA29 543 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 OR52N2Q8NGI0 321 aa16.05■□□□□ 0.16
PTPN20-203ENST00000374342 UCN3Q969E3 161 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms