RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MTMR11A4FU01 709 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 NFKBIEO00221 500 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 HOXC8P31273 242 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 GGT5P36269 586 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 MECP2P51608 486 aaKnown RBP13.71□□□□□ -0.21
LMX1B-202ENST00000373474 FGL1Q08830 312 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF252P-AS1Q0IIN9 211 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 TOR1AIP1Q5JTV8 583 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 C22orf39Q6P5X5 142 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 SHQ1Q6PI26 577 aaKnown RBP13.71□□□□□ -0.21
LMX1B-202ENST00000373474 OR56A1Q8NGH5 318 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 RETREG1Q9H6L5 497 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 MYNNQ9NPC7 610 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 TEX13CA0A0J9YWL9 993 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 AGAP5A6NIR3 686 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 C1orf196B1AJZ1 125 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 PSMD9O00233 223 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 SCAMP1O15126 338 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 MAFKO60675 156 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 IFNA1P01562 189 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 CSN2P05814 226 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 MAGEA6P43360 314 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ST3GAL3Q11203 375 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 CEACAM7Q14002 265 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 SLC8B1Q6J4K2 584 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF783Q6ZMS7 281 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 Q6ZVU0 165 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 CLDN19Q8N6F1 224 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 OR6K6Q8NGW6 343 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 CPNE2Q96FN4 548 aaPredicted RBP13.71□□□□□ -0.21
LMX1B-202ENST00000373474 GAL3ST4Q96RP7 486 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 SH3PXD2BA1X283 911 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF878C9JN71 531 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ERI3O43414 337 aaKnown RBP13.71□□□□□ -0.21
LMX1B-202ENST00000373474 RCBTB2O95199 551 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 BPNT1O95861 308 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ADH5P11766 374 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 AGTR1P30556 359 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 LIPJQ5W064 366 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ARSKQ6UWY0 536 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ZFAND4Q86XD8 727 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 RNF130Q86XS8 419 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ATP6V1C2Q8NEY4 427 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 IL3P08700 152 aa13.71□□□□□ -0.22
LMX1B-202ENST00000373474 MAT2AP31153 395 aaKnown RBP13.71□□□□□ -0.22
LMX1B-202ENST00000373474 NOVP48745 357 aa13.71□□□□□ -0.22
LMX1B-202ENST00000373474 CDKN2DP55273 166 aa13.71□□□□□ -0.22
LMX1B-202ENST00000373474 GPR68Q15743 365 aa13.71□□□□□ -0.22
LMX1B-202ENST00000373474 GNPDA2Q8TDQ7 276 aa13.71□□□□□ -0.22
LMX1B-202ENST00000373474 TRUB1Q8WWH5 349 aaKnown RBP13.71□□□□□ -0.22
LMX1B-202ENST00000373474 ARMC5Q96C12 935 aa13.71□□□□□ -0.22
LMX1B-202ENST00000373474 SLA2Q9H6Q3 261 aa13.71□□□□□ -0.22
LMX1B-202ENST00000373474 UNKLQ9H9P5 680 aaKnown RBP13.71□□□□□ -0.22
LMX1B-202ENST00000373474 MS4A12Q9NXJ0 267 aa13.71□□□□□ -0.22
LMX1B-202ENST00000373474 HCN3Q9P1Z3 774 aa13.71□□□□□ -0.22
LMX1B-202ENST00000373474 EXOSC1Q9Y3B2 195 aaKnown RBP13.71□□□□□ -0.22
LMX1B-202ENST00000373474 ARVCFO00192 962 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 HSPA12AO43301 675 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 BEST1O76090 585 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 ACP5P13686 325 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 FDXRP22570 491 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 CLCN7P51798 805 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 SCAPQ12770 1279 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 TMEM236Q5W0B7 351 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 TCEAL3Q969E4 200 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 BARD1Q99728 777 aaKnown RBP13.7□□□□□ -0.22
LMX1B-202ENST00000373474 HAPLN2Q9GZV7 340 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 ADAP2Q9NPF8 381 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 IFT52Q9Y366 437 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 COL2A1P02458 1487 aaPredicted RBP13.7□□□□□ -0.22
LMX1B-202ENST00000373474 SLC16A5O15375 505 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 JUNP05412 331 aaKnown RBP13.7□□□□□ -0.22
LMX1B-202ENST00000373474 PABPC4LP0CB38 370 aaKnown RBP13.7□□□□□ -0.22
LMX1B-202ENST00000373474 LAPTM4AQ15012 233 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 TXNDC8Q6A555 127 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 PDZD9Q8IXQ8 264 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 DFNA5O60443 496 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 ZNF182P17025 639 aaPredicted RBP13.7□□□□□ -0.22
LMX1B-202ENST00000373474 UQCRC2P22695 453 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 NDUFS1P28331 727 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 FNTBP49356 437 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 COL28A1Q2UY09 1125 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 PIGGQ5H8A4 983 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 MCEMP1Q8IX19 187 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 UMODL1-AS1Q8N2C9 162 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 ZNF675Q8TD23 568 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 SMPDL3AQ92484 453 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 KLK6Q92876 244 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 ZNF649Q9BS31 505 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 CDH10Q9Y6N8 788 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 EDDM13A0A1B0GTR0 161 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 ZNF670-ZNF695F2Z2N8 137 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 SOCS2O14508 198 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 SLC31A1O15431 190 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 TLX2O43763 284 aaPredicted RBP13.7□□□□□ -0.22
LMX1B-202ENST00000373474 PDYNP01213 254 aa13.7□□□□□ -0.22
LMX1B-202ENST00000373474 APOC3P02656 99 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms