RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 IRF1P10914 325 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 DDX5P17844 614 aaKnown RBP15.17■□□□□ 0.02
PABPC4-202ENST00000372857 RAB25P57735 213 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 NFATC2Q13469 925 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 ARHGEF6Q15052 776 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 IFI44LQ53G44 452 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 TJAP1Q5JTD0 557 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 MFSD14CQ5VZR4 134 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 FRG2Q64ET8 278 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 XKRXQ6PP77 449 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 KLHL17Q6TDP4 642 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 TMIGD1Q6UXZ0 262 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 CERS6Q6ZMG9 384 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
PABPC4-202ENST00000372857 TMEM173Q86WV6 379 aaPredicted RBP15.17■□□□□ 0.02
PABPC4-202ENST00000372857 TMC8Q8IU68 726 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 CPA6Q8N4T0 437 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 CSGALNACT1Q8TDX6 532 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 CCDC120Q96HB5 630 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 FRG2BQ96QU4 278 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 ATG10Q9H0Y0 220 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 SEC14L4Q9UDX3 406 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 CRLS1Q9UJA2 301 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 SSR3Q9UNL2 185 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 GASTP01350 101 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 POU3F3P20264 500 aaPredicted RBP15.17■□□□□ 0.02
PABPC4-202ENST00000372857 ALAS2P22557 587 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 APEX1P27695 318 aaKnown RBP15.17■□□□□ 0.02
PABPC4-202ENST00000372857 MAN2A2P49641 1150 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 CAV3P56539 151 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 TARDBPQ13148 414 aaKnown RBP eCLIP15.17■□□□□ 0.02
PABPC4-202ENST00000372857 MSANTD1Q6ZTZ1 278 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 PLCZ1Q86YW0 608 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 FAM120CQ9NX05 1096 aaKnown RBP15.17■□□□□ 0.02
PABPC4-202ENST00000372857 NLKQ9UBE8 527 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 SLC23A1Q9UHI7 598 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 YARS2Q9Y2Z4 477 aaKnown RBP15.17■□□□□ 0.02
PABPC4-202ENST00000372857 SLC35F4A4IF30 521 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 PCGF2P35227 344 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 HMGCLP35914 325 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 HKDC1Q2TB90 917 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 CDONQ4KMG0 1287 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 LAMTOR1Q6IAA8 161 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 CREB3L4Q8TEY5 395 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 LINC01599Q8WXQ3 324 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 MCUBQ9NWR8 336 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 KCNN3Q9UGI6 736 aa15.17■□□□□ 0.02
PABPC4-202ENST00000372857 LSM2Q9Y333 95 aaKnown RBP15.17■□□□□ 0.02
PABPC4-202ENST00000372857 IQCMA0A1B0GVH7 501 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 HYKKA2RU49 373 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 LEUTXA8MZ59 168 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 TNFRSF21O75509 655 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 BNC1Q01954 994 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 TEKQ02763 1124 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 RNF219Q5W0B1 726 aaPredicted RBP15.16■□□□□ 0.02
PABPC4-202ENST00000372857 PRSS55Q6UWB4 352 aaPredicted RBP15.16■□□□□ 0.02
PABPC4-202ENST00000372857 UBE2R2Q712K3 238 aaPredicted RBP15.16■□□□□ 0.02
PABPC4-202ENST00000372857 GLRX5Q86SX6 157 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 DENND1CQ8IV53 801 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 NFKBIDQ8NI38 313 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 TMEM121BQ9BXQ6 578 aaPredicted RBP15.16■□□□□ 0.02
PABPC4-202ENST00000372857 TM6SF2Q9BZW4 377 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 IL26Q9NPH9 171 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 ACER3Q9NUN7 267 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 SH3BP4Q9P0V3 963 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 PLEKHB1Q9UF11 243 aaPredicted RBP15.16■□□□□ 0.02
PABPC4-202ENST00000372857 ABT1Q9ULW3 272 aaKnown RBP15.16■□□□□ 0.02
PABPC4-202ENST00000372857 HCN4Q9Y3Q4 1203 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 SH3D21A4FU49 640 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 GABRR3A8MPY1 467 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 H3BNC9 293 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 ADAMTS4O75173 837 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 GADD45GO95257 159 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 IGHA2P01877 340 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 HLA-DMAP28067 261 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 CSTF2P33240 577 aaKnown RBP eCLIP15.16■□□□□ 0.02
PABPC4-202ENST00000372857 CRISP1P54107 249 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 FKBP1BP68106 108 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 FRMPD2BQ6IN97 320 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 OR8J2Q8NGG1 315 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 BTN2A2Q8WVV5 523 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 SOCS4Q8WXH5 440 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 SLC25A46Q96AG3 418 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 TRIM45Q9H8W5 580 aaPredicted RBP15.16■□□□□ 0.02
PABPC4-202ENST00000372857 FTSJ1Q9UET6 329 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 FCF1Q9Y324 198 aaKnown RBP15.16■□□□□ 0.02
PABPC4-202ENST00000372857 SNX11Q9Y5W9 270 aa15.16■□□□□ 0.02
PABPC4-202ENST00000372857 ZAR1LA6NP61 321 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 ZNF623O75123 536 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 C1QBP02746 253 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 MSL3P1P0C860 447 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 CPN2P22792 545 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 MAP2K3P46734 347 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 ARF5P84085 180 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 RHAGQ02094 409 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 CHIT1Q13231 466 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 TNK1Q13470 666 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 CHRNA6Q15825 494 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 TOR2AQ5JU69 321 aa15.15■□□□□ 0.02
PABPC4-202ENST00000372857 ADNP2Q6IQ32 1131 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms