RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ELOA3BQ3SY89 546 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 UBAP2Q5T6F2 1119 aaKnown RBP13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 ELOA3Q8NG57 546 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 MOAP1Q96BY2 351 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 P2RY13Q9BPV8 354 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 PRRG4Q9BZD6 226 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 QRSL1Q9H0R6 528 aaKnown RBP13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 SGK2Q9HBY8 427 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 TVP23BQ9NYZ1 205 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 MRTO4Q9UKD2 239 aaKnown RBP13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 RPS10-NUDT3A0A1W2PQS6 291 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 ITM2AO43736 263 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 FADS1O60427 444 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 SFTPBP07988 381 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 RPS10P46783 165 aaKnown RBP13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 FXYD6P3P58550 94 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 CCBE1Q6UXH8 406 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 SSX7Q7RTT5 188 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 PIGWQ7Z7B1 504 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 TMPRSS11BQ86T26 416 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 LRRC57Q8N9N7 239 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 OR52J3Q8NH60 311 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 KCNN1Q92952 543 aa13.59□□□□□ -0.23
RAPGEF1-202ENST00000372190 FAM230AA0A1W2PPH8 454 aa13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 WASH3PC4AMC7 463 aa13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 MAN2B1O00754 1011 aa13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 ANGPTL7O43827 346 aa13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 BEST1O76090 585 aa13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 PKMP14618 531 aaKnown RBP13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 RPL13AP40429 203 aaKnown RBP13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 SLC26A5P58743 744 aa13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 PCYT2Q99447 389 aa13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 TP63Q9H3D4 680 aaPredicted RBP13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 GAREM1Q9H706 876 aa13.58□□□□□ -0.23
RAPGEF1-202ENST00000372190 NOBOXO60393 691 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 OR8U9P0C7N5 309 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 BCKDHAP12694 445 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 HERV-K104P61576 105 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 PRAMEF13Q5VWM6 474 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 BEND4Q6ZU67 534 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 KBTBD6Q86V97 674 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 PLD5Q8N7P1 536 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 PAPD5Q8NDF8 572 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF439Q8NDP4 499 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CPT1BQ92523 772 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 ISOC1Q96CN7 298 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 AARSD1Q9BTE6 412 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CARS2Q9HA77 564 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 WASH6PQ9NQA3 447 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF358Q9NW07 568 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 DMAC2Q9NW81 257 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 A0A096LPI6 279 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 A0A1W2PPW3 197 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 SNRPD2P62316 118 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 MLLT1Q03111 559 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 DSG2Q14126 1118 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 BAIAP2L2Q6UXY1 529 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZDHHC21Q8IVQ6 265 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 FTMTQ8N4E7 242 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF516Q92618 1163 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 C5orf34Q96MH7 638 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 TCRBV7S2A1N4TA0A589 114 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 FOXO6A8MYZ6 492 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 GPR89AB7ZAQ6 455 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 LRATO95237 230 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 DCNP07585 359 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 GPR89BP0CG08 455 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 NKX2-5P52952 324 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 JAM2P57087 298 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 DSTNP60981 165 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CPSF6Q16630 551 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 HSDL2Q6YN16 418 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CARM1Q86X55 608 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CRYBG2Q8N1P7 616 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 TCEANCQ8N8B7 351 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 PPM1MQ96MI6 270 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 SUV39H2Q9H5I1 410 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 TFB2MQ9H5Q4 396 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 POMPQ9Y244 141 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 KLF8O95600 359 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 ANXA8P13928 327 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CHRNB2P17787 502 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CD247P20963 164 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC7A1P30825 629 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 MPIP34949 423 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 IGFALSP35858 605 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CD97P48960 835 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 ARRB1P49407 418 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 PRKXP51817 358 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 FGFBP1Q14512 234 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 AVPI1Q5T686 147 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CST9Q5W186 159 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 SERPINA9Q86WD7 417 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 OR6C4Q8NGE1 309 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 OVCA2Q8WZ82 227 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 GLTPQ9NZD2 209 aa13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 CNOT6Q9ULM6 557 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-202ENST00000372190 WNT9AO14904 365 aa13.57□□□□□ -0.24
RAPGEF1-202ENST00000372190 GPR32O75388 356 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms