RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 IL21RQ9HBE5 538 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 A0A1B0GTQ1 180 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 EVPLLA8MZ36 301 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 PRAMEF10O60809 474 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 SCELO95171 688 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 ZCCHC18P0CG32 403 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 GIMD1P0DJR0 217 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 GLB1P16278 677 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 SUZ12Q15022 739 aaKnown RBP24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 AASDHQ4L235 1098 aaPredicted RBP24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 FRMPD2BQ6IN97 320 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 ZFP1Q6P2D0 407 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 SPATA24Q86W54 205 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 SLC35F3Q8IY50 421 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 C19orf47Q8N9M1 422 aaKnown RBP24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 FAM47BQ8NA70 645 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 TNIP2Q8NFZ5 429 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 DUSP23Q9BVJ7 150 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 NLGN3Q9NZ94 848 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 EPHA6Q9UF33 1036 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 MUC3AQ02505 3323 aa24.99■■□□□ 1.59
ATPAF1-202ENST00000371937 LOC105369274A0A096LPK9 316 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 LOC102723532A0A0G2JNH3 316 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 YKT6O15498 198 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 EPN2O95208 641 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 CFIP05156 583 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ZNF10P21506 573 aaPredicted RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ALDH4A1P30038 563 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 GPR3P46089 330 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ALDH9A1P49189 494 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 MUM1Q2TAK8 710 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ZC3H12BQ5HYM0 836 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 MRM1Q6IN84 353 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ABHD13Q7L211 337 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 OR4N4Q8N0Y3 316 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 GOT1L1Q8NHS2 421 aaPredicted RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 UTP15Q8TED0 518 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ZNF583Q96ND8 569 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 NLNQ9BYT8 704 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 KAT8Q9H7Z6 458 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 EHD3Q9NZN3 535 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 EGFL7Q9UHF1 273 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ANGPTL2Q9UKU9 493 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 VPS4AQ9UN37 437 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 PCDHB3Q9Y5E6 796 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 SNX13Q9Y5W8 968 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ZNF888P0CJ79 500 aaPredicted RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 BTN3A2P78410 334 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 FXNQ16595 210 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 HLA-BQ31612 363 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 MMP21Q8N119 569 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 OR4A15Q8NGL6 344 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ZDHHC12Q96GR4 267 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 TCTN2Q96GX1 697 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 AHCYL2Q96HN2 611 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 RSRC1Q96IZ7 334 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 CCDC3Q9BQI4 270 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 IKZF5Q9H5V7 419 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 LYARQ9NX58 379 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 TEX10Q9NXF1 929 aaPredicted RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ZNF282Q9UDV7 671 aaPredicted RBP24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 ASB4Q9Y574 426 aa24.98■■□□□ 1.59
ATPAF1-202ENST00000371937 TMEM131Q92545 1883 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 SLC9B1P1A6NJY1 282 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 CLIC1O00299 241 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 P2RX6O15547 441 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 ALPPL2P10696 532 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 PPIBP23284 216 aaKnown RBP24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 SLC34A1Q06495 639 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 NDUFAF5Q5TEU4 345 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 LCN8Q6JVE9 175 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 BMP8AQ7Z5Y6 402 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 PROSER1Q86XN7 944 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 OR2T12Q8NG77 320 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 OR10A6Q8NH74 314 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 CIDECQ96AQ7 238 aaPredicted RBP24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 AURKBQ96GD4 344 aaPredicted RBP24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 CD180Q99467 661 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 MAP3K3Q99759 626 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 PIF1Q9H611 641 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 TAS2R7Q9NYW3 318 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 STOML1Q9UBI4 398 aa24.97■■□□□ 1.59
ATPAF1-202ENST00000371937 A0A1W2PRB8 838 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 ARPC2O15144 300 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 EIF2S1P05198 315 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 SMIM10L1P0DMW3 83 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 EFNA1P20827 205 aaPredicted RBP24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 CERS1P27544 350 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 MRPS22P82650 360 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 RHDQ02161 417 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 MPEG1Q2M385 716 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 ZCCHC8Q6NZY4 707 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 CYP2R1Q6VVX0 501 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 TRIML2Q8N7C3 387 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 ZBTB44Q8NCP5 570 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 NCSTNQ92542 709 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 SMIM10Q96HG1 83 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 ERVK-11Q9UQG0 969 aa24.96■■□□□ 1.59
ATPAF1-202ENST00000371937 PI4KAP42356 2102 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms