RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 OR52A5Q9H2C5 316 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 SRMSQ9H3Y6 488 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 NOL11Q9H8H0 719 aaKnown RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 FANCEQ9HB96 536 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 C1GALT1Q9NS00 363 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 MAGEL2Q9UJ55 1249 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 TRMT6Q9UJA5 497 aaKnown RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 ANAPC2Q9UJX6 822 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 FIS1Q9Y3D6 152 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 DNAJC15Q9Y5T4 150 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 OR6C74A6NCV1 312 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 SUPT3HB4E1H0 165 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 SUV39H1O43463 412 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 SUPT3HO75486 399 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 PGM3O95394 542 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 LDLRP01130 860 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 RPN2P04844 631 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 RPS17P08708 135 aaKnown RBP9.93□□□□□ -0.82
COL5A1-202ENST00000371820 ENO2P09104 434 aaPredicted RBP9.93□□□□□ -0.82
COL5A1-202ENST00000371820 CCNYL3P0C7X3 344 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 PRR35P0CG20 571 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 LIFP15018 202 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 CDH3P22223 829 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 SHMT2P34897 504 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 CCR10P46092 362 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 PIK3CGP48736 1102 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 RGS4P49798 205 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 CDKN2DP55273 166 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 SH3BP2P78314 561 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 EMX2Q04743 252 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 PRKG2Q13237 762 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 DCTN2Q13561 401 aaKnown RBP9.93□□□□□ -0.82
COL5A1-202ENST00000371820 TUBA3CQ13748 450 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 NFYCQ13952 458 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 BOP1Q14137 746 aaKnown RBP9.93□□□□□ -0.82
COL5A1-202ENST00000371820 ZNF460Q14592 562 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 NHSL2Q5HYW2 709 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 CDKL4Q5MAI5 379 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 C6orf52Q5T4I8 152 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 C6orf15Q6UXA7 325 aaPredicted RBP9.93□□□□□ -0.82
COL5A1-202ENST00000371820 GPSM1Q86YR5 675 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 FUNDC1Q8IVP5 155 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 SLC15A3Q8IY34 581 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 DPP10Q8N608 796 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 LILRA3Q8N6C8 439 aaPredicted RBP9.93□□□□□ -0.82
COL5A1-202ENST00000371820 OR52E4Q8NGH9 312 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 ANKRD49Q8WVL7 239 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 KCNJ9Q92806 393 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 NMD3Q96D46 503 aaKnown RBP9.93□□□□□ -0.82
COL5A1-202ENST00000371820 MAGED4Q96JG8 741 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 PPP3R2Q96LZ3 170 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 MAP3K3Q99759 626 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 HGH1Q9BTY7 390 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 SPRY4Q9C004 299 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 RBM38Q9H0Z9 239 aaKnown RBP9.93□□□□□ -0.82
COL5A1-202ENST00000371820 PCDHAC1Q9H158 963 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 AIG1Q9NVV5 245 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 SOHLH2Q9NX45 425 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 NUDT4Q9NZJ9 180 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 MAP10Q9P2G4 905 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 KLHL42Q9P2K6 505 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 IL17BQ9UHF5 180 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 KCND3Q9UK17 655 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 POMT2Q9UKY4 750 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 ASF1AQ9Y294 204 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 CRYL1Q9Y2S2 319 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 PCDHB3Q9Y5E6 796 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 PCDHA9Q9Y5H5 950 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 GPR45Q9Y5Y3 372 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 PTPN13Q12923 2485 aa9.93□□□□□ -0.82
COL5A1-202ENST00000371820 IGHV5-51A0A0C4DH38 117 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 GSAPA4D1B5 854 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 OR51F1A6NGY5 319 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 CYSRT1A8MQ03 144 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 C2orf74A8MZ97 194 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 TMEM233B4DJY2 109 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 SLC28A1O00337 649 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 NR5A2O00482 541 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 PRMT5O14744 637 aaPredicted RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 PIP5K1BO14986 540 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 KPNA5O15131 536 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 DEAF1O75398 565 aaPredicted RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 WDR47O94967 919 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 RASAL1O95294 804 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 HPRP00739 348 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 JUNP05412 331 aaKnown RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 PRSS56P0CW18 603 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 ATP6V1B1P15313 513 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 POLR2CP19387 275 aaPredicted RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 EEF1DP29692 281 aaKnown RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 GMPRP36959 345 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 STAT5AP42229 794 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 PREPP48147 710 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 POLR2JP52435 117 aaKnown RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 PCBP2Q15366 365 aaKnown RBP eCLIP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 ATP6AP1Q15904 470 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 SLC36A3Q495N2 470 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 ZNF658BQ4V348 819 aaPredicted RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 ATP6AP1LQ52LC2 224 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 FAM98BQ52LJ0 330 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms