RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 ERVK-11Q9UQG0 969 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 BTBD3Q9Y2F9 522 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 DMXL1Q9Y485 3027 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ZFHX2Q9C0A1 2572 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 FOXE1O00358 373 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 BTN3A3O00478 584 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 SCAMP2O15127 329 aaKnown RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 C1QCP02747 245 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 LAMP1P11279 417 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 PEBP1P30086 187 aaKnown RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 SHMT2P34897 504 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 CLCN2P51788 898 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 MEF2AQ02078 507 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 NKG7Q16617 165 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 FAM98BQ52LJ0 330 aaKnown RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 PAGE2BQ5JRK9 111 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ANKRD26P1Q6NSI1 321 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ENPP6Q6UWR7 440 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ADGRF3Q8IZF5 1079 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 RAB42Q8N4Z0 105 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ARL10Q8N8L6 244 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 OR4C6Q8NH72 309 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 SETD7Q8WTS6 366 aaKnown RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ZFPM2Q8WW38 1151 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 SMPDL3AQ92484 453 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 TFAP2CQ92754 450 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 SH3KBP1Q96B97 665 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 RAB11FIP5Q9BXF6 653 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF696Q9H7X3 374 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 DMRT3Q9NQL9 472 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 RXFP3Q9NSD7 469 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 FAM120CQ9NX05 1096 aaKnown RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 OR6C2Q9NZP2 312 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 TAC3Q9UHF0 121 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ASXL3Q9C0F0 2248 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 SNRNP200O75643 2136 aaKnown RBP16.5■□□□□ 0.23
UBE3D-203ENST00000369747 RNF103-CHMP3A0A140T963 221 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 PLOD2O00469 737 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 YKT6O15498 198 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 CLOCKO15516 846 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 TNFAIP8O95379 198 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 TIA1P31483 386 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBE3D-203ENST00000369747 ASMTP46597 345 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 CHRNB3Q05901 458 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 ABHD18Q0P651 414 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 SPEM2Q0P670 501 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 MAP7Q14244 749 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 C10orf62Q5T681 223 aaPredicted RBP16.5■□□□□ 0.23
UBE3D-203ENST00000369747 PRAMEF13Q5VWM6 474 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 GALNT18Q6P9A2 607 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 LCTLQ6UWM7 567 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 FAM20CQ8IXL6 584 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 FBXO30Q8TB52 745 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 FAM162AQ96A26 154 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 PANX1Q96RD7 426 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 ANKRD60Q9BZ19 345 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 NTN4Q9HB63 628 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 C8orf4Q9NR00 106 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF292O60281 2723 aa16.5■□□□□ 0.23
UBE3D-203ENST00000369747 HEATR5BQ9P2D3 2071 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 OR6C74A6NCV1 312 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 GABRR3A8MPY1 467 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 UPK1AO00322 258 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 DLL1O00548 723 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 EI24O14681 340 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 SIGLEC6O43699 453 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 KDM1AO60341 852 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 CREG1O75629 220 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 PRSS23O95084 383 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 CHRM5P08912 532 aaPredicted RBP16.49■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF806P0C7X5 589 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 BIRC2Q13490 618 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 HIST2H2ACQ16777 129 aaPredicted RBP16.49■□□□□ 0.23
UBE3D-203ENST00000369747 HKDC1Q2TB90 917 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 HIST2H2AA3Q6FI13 130 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 ZCCHC8Q6NZY4 707 aaKnown RBP16.49■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF438Q7Z4V0 828 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 CLECL1Q8IZS7 167 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 EID2Q8N6I1 236 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF740Q8NDX6 193 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 OR2A1Q8NGT9 310 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 OR10G6Q8NH81 332 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 STARD8Q92502 1023 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 REXO5Q96IC2 774 aaKnown RBP16.49■□□□□ 0.23
UBE3D-203ENST00000369747 VPS50Q96JG6 964 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 BDH2Q9BUT1 245 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 UGT2B28Q9BY64 529 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 PRM3Q9NNZ6 103 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 SIRT5Q9NXA8 310 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 LRIT1Q9P2V4 623 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 RNF215Q9Y6U7 377 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 MYOCOSA0A1B0GUC4 107 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 PRICKLE3O43900 615 aaPredicted RBP16.49■□□□□ 0.23
UBE3D-203ENST00000369747 PCDH7O60245 1069 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 PCDHGA12O60330 932 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 TYRP1P17643 537 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 POLR2CP19387 275 aaPredicted RBP16.49■□□□□ 0.23
UBE3D-203ENST00000369747 LAPTM5Q13571 262 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 GPR155Q7Z3F1 870 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 CAMKMTQ7Z624 323 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms