RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 DOK4Q8TEW6 326 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 COX14Q96I36 57 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 QRFPRQ96P65 431 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 KCNC2Q96PR1 638 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 TEX10Q9NXF1 929 aaPredicted RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 EBF1Q9UH73 591 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 RNASET2O00584 256 aaKnown RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 HOXB3P14651 431 aaPredicted RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 DNAJA1P31689 397 aaKnown RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 FEN1P39748 380 aaKnown RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 PIK3CBP42338 1070 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 LSM3P62310 102 aaKnown RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 RAPSNQ13702 412 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 TJAP1Q5JTD0 557 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 IRAK1BP1Q5VVH5 260 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 MSANTD1Q6ZTZ1 278 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 LAS2Q8IYD9 372 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 IL17RCQ8NAC3 791 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 LINC01555Q8NAE3 123 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 ZCCHC10Q8TBK6 192 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 GTPBP3Q969Y2 492 aaKnown RBP13.19□□□□□ -0.3
SHC1-202ENST00000368445 PCBD2Q9H0N5 130 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 ZNF556Q9HAH1 456 aa13.19□□□□□ -0.3
SHC1-202ENST00000368445 SLC28A2O43868 658 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 NME6O75414 186 aaPredicted RBP13.18□□□□□ -0.3
SHC1-202ENST00000368445 ANGPTL1O95841 491 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 ASGR2P07307 311 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 TPP2P29144 1249 aaPredicted RBP13.18□□□□□ -0.3
SHC1-202ENST00000368445 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
SHC1-202ENST00000368445 CLCN2P51788 898 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 ADPRHP54922 357 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 EPS8Q12929 822 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 TEAD4Q15561 434 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 KCTD21Q4G0X4 260 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 OLIG3Q7RTU3 272 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 TBC1D19Q8N5T2 526 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 AMER3Q8N944 861 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 FBXO15Q8NCQ5 510 aaPredicted RBP13.18□□□□□ -0.3
SHC1-202ENST00000368445 RPLP0P6Q8NHW5 317 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 UCN3Q969E3 161 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 UBE2FQ969M7 185 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 ELSPBP1Q96BH3 223 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 PDXPQ96GD0 296 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 LMAN2LQ9H0V9 348 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 ARMC7Q9H6L4 198 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 EXO1Q9UQ84 846 aaKnown RBP13.18□□□□□ -0.3
SHC1-202ENST00000368445 DOCK8Q8NF50 2099 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 H0YAE9 185 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 CEACAM5P06731 702 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 IGFALSP35858 605 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 ADARB1P78563 741 aaKnown RBP13.18□□□□□ -0.3
SHC1-202ENST00000368445 TFF2Q03403 129 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 Q6ZPB1 254 aaPredicted RBP13.18□□□□□ -0.3
SHC1-202ENST00000368445 CYP4Z1Q86W10 505 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 DOHHQ9BU89 302 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 TM9SF3Q9HD45 589 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 SPHK1Q9NYA1 384 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 PLXNB3Q9ULL4 1909 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 ZW10O43264 779 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 NR2F1P10589 423 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 COL9A1P20849 921 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 GZMMP51124 257 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 DSTNP60981 165 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 CCDC85BQ15834 202 aaPredicted RBP13.18□□□□□ -0.3
SHC1-202ENST00000368445 C6orf141Q5SZD1 244 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 FAM71E1Q6IPT2 247 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 DEF8Q6ZN54 512 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 MTSS1LQ765P7 747 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 TRIM73Q86UV7 250 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 CCDC116Q8IYX3 515 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 COQ8BQ96D53 544 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 SRMSQ9H3Y6 488 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 EHD1Q9H4M9 534 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 MAGIXQ9H6Y5 334 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 ZCCHC3Q9NUD5 404 aaKnown RBP13.18□□□□□ -0.3
SHC1-202ENST00000368445 SCN3BQ9NY72 215 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 TAAR2Q9P1P5 351 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 ANGPT4Q9Y264 503 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 CEPT1Q9Y6K0 416 aa13.18□□□□□ -0.3
SHC1-202ENST00000368445 A0A0J9YVX5 310 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 J3KTA2 159 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 FAM20BO75063 409 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 IFNA14P01570 189 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 C7P10643 843 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 EPHA2P29317 976 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 SLC5A2P31639 672 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 HSD17B2P37059 387 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 PRDX1Q06830 199 aaKnown RBP13.17□□□□□ -0.3
SHC1-202ENST00000368445 RAB39AQ14964 217 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 MLF2Q15773 248 aaPredicted RBP13.17□□□□□ -0.3
SHC1-202ENST00000368445 FXNQ16595 210 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 IFI44LQ53G44 452 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 CBLL1Q75N03 491 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 PIK3C3Q8NEB9 887 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 PHF10Q8WUB8 498 aaKnown RBP13.17□□□□□ -0.3
SHC1-202ENST00000368445 KLHL31Q9H511 634 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 CXorf36Q9H7Y0 433 aa13.17□□□□□ -0.3
SHC1-202ENST00000368445 TRPV4Q9HBA0 871 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms