RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 RPL5P46777 297 aaKnown RBP11.5□□□□□ -0.57
USF1-203ENST00000368021 ARRB1P49407 418 aaPredicted RBP11.5□□□□□ -0.57
USF1-203ENST00000368021 DGKQP52824 942 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 MAZP56270 477 aaKnown RBP11.5□□□□□ -0.57
USF1-203ENST00000368021 CYP4F2P78329 520 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 NFYCQ13952 458 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 ZIC1Q15915 447 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 MAPKAPK3Q16644 382 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 ARPINQ7Z6K5 226 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 GATAD2AQ86YP4 633 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 PLD3Q8IV08 490 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 GTF2H4Q92759 462 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 RGMAQ96B86 450 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 THAP11Q96EK4 314 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 ELF4Q99607 663 aaPredicted RBP11.5□□□□□ -0.57
USF1-203ENST00000368021 ZNF717Q9BY31 904 aaPredicted RBP11.5□□□□□ -0.57
USF1-203ENST00000368021 PLGRKTQ9HBL7 147 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 PALMDQ9NP74 551 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 MYNNQ9NPC7 610 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 FAM32AQ9Y421 112 aaKnown RBP11.5□□□□□ -0.57
USF1-203ENST00000368021 TMEM131Q92545 1883 aa11.5□□□□□ -0.57
USF1-203ENST00000368021 A0A0J9YY10 115 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 SH3PXD2BA1X283 911 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 SAP18O00422 153 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 SCAMP2O15127 329 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 NDUFS4O43181 175 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 FKBP6O75344 327 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 UBXN7O94888 489 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 MAGP20916 626 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 SLC6A2P23975 617 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 S100A3P33764 101 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 BSGP35613 385 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 HPCAL1P37235 193 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 RPL3P39023 403 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 KIR3DL1P43629 444 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 TSFMP43897 325 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 HNRNPFP52597 415 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 ACTR3P61158 418 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 BNIP3Q12983 259 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 UGT8Q16880 541 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 DEFB133Q30KQ1 61 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 C14orf28Q4W4Y0 310 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 SAMD4BQ5PRF9 694 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 C6orf132Q5T0Z8 1188 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 C1orf146Q5VVC0 180 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 SLC2A7Q6PXP3 512 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 FIGLAQ6QHK4 219 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 DLEU7Q6UYE1 221 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 IKBIPQ70UQ0 350 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 GPR180Q86V85 440 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 HPS6Q86YV9 775 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 MPP4Q96JB8 637 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 OR52E6Q96RD3 313 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 F2RL3Q96RI0 385 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 PRPF18Q99633 342 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 REXO4Q9GZR2 422 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 RMND5AQ9H871 391 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 UCKL1Q9NWZ5 548 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 POMT2Q9UKY4 750 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 PADI4Q9UM07 663 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 MAN2B2Q9Y2E5 1009 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 ARID1BQ8NFD5 2236 aaPredicted RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 SLC30A4O14863 429 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 CAPN5O15484 640 aaPredicted RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 LRATO95237 230 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 KCNH1O95259 989 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 PSMG1O95456 288 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 KLK1P06870 262 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 ME2P23368 584 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 CAPZBP47756 277 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 ID4P47928 161 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 EPHA4P54764 986 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 AP2B1P63010 937 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 HYAL2Q12891 473 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 PWP1Q13610 501 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 CEACAM7Q14002 265 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 SPCS2Q15005 226 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 ARMC6Q6NXE6 501 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 AAGABQ6PD74 315 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 Q6ZNX1 250 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 R3HCC1LQ7Z5L2 792 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 DHDDSQ86SQ9 333 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 NUDT13Q86X67 352 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 SLC25A45Q8N413 288 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 SRFBP1Q8NEF9 429 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 WDR48Q8TAF3 677 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 BAHD1Q8TBE0 780 aaPredicted RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 NUDT8Q8WV74 236 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 RSC1A1Q92681 617 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 MTERF3Q96E29 417 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 SLC39A3Q9BRY0 314 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 DDX31Q9H8H2 851 aaKnown RBP11.49□□□□□ -0.57
USF1-203ENST00000368021 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 CD300AQ9UGN4 299 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 ATP6V1HQ9UI12 483 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 PILRAQ9UKJ1 303 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 POMPQ9Y244 141 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 KLHL20Q9Y2M5 609 aa11.49□□□□□ -0.57
USF1-203ENST00000368021 TRIM38O00635 465 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 SH3BP5O60239 455 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms