RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CRYBG1Q9Y4K1 1723 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 C5P01031 1676 aa8.35□□□□□ -1.07
SYNE1-206ENST00000367253 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TRGV8A0A0C4DH27 118 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 FABP12A6NFH5 140 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TMEM221A6NGB7 291 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 E7EQ34 232 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 M0R296 226 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 PRMT5O14744 637 aaPredicted RBP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TO15178 435 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 SRPRAP08240 638 aaKnown RBP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 CTPS1P17812 591 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 FABP6P51161 128 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 SPIBQ01892 262 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ST3GAL4Q11206 333 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 EIF3IQ13347 325 aaKnown RBP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 MAB21L1Q13394 359 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF674Q2M3X9 581 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ADGRF1Q5T601 910 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 WDR59Q6PJI9 974 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 XKRXQ6PP77 449 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 CADM2Q8N3J6 435 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 FCRL2Q96LA5 508 aaPredicted RBP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 HHIPQ96QV1 700 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 NODALQ96S42 347 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ACTRT3Q9BYD9 372 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ENY2Q9NPA8 101 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TMEM9Q9P0T7 183 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 CYB5R1Q9UHQ9 305 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 BOKQ9UMX3 212 aaPredicted RBP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 A0A087X1B8 175 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 OR2AG2A6NM03 316 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 CLPXO76031 633 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 PRAMEF1O95521 474 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ANGPTL1O95841 491 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 IFNA21P01568 189 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 NUDT17P0C025 328 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 COX6B1P14854 86 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF28P17035 718 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 GLRA2P23416 452 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 CXCR1P25024 350 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TNFSF9P41273 254 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TPMTP51580 245 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 POU6F1Q14863 301 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 PTPN20Q4JDL3 420 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 MREGQ8N565 214 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 NINJ1Q92982 152 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 GBA3Q9H227 469 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 Q9N2J8 555 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 MTMR10Q9NXD2 777 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ABCA3Q99758 1704 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TEX13CA0A0J9YWL9 993 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 DUXAA6NLW8 204 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 CYP4B1P13584 511 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 EPORP19235 508 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 LHCGRP22888 699 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 MMP8P22894 467 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ECHS1P30084 290 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 CD86P42081 329 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 NAGLUP54802 743 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ADAM8P78325 824 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 BST1Q10588 318 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 VAMP3Q15836 100 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 FLYWCH1Q4VC44 716 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TP53INP2Q8IXH6 220 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 FAM216AQ8WUB2 273 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 HTR3CQ8WXA8 447 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 PKP4Q99569 1192 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 SLC6A16Q9GZN6 736 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TMEM184CQ9NVA4 438 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 FAIMQ9NVQ4 179 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 HRASLS2Q9NWW9 162 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 SMPD3Q9NY59 655 aaPredicted RBP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 TNFRSF10DQ9UBN6 386 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 SPEF2Q9C093 1822 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 SCDO00767 359 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 QDPRP09417 244 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 HLA-EP13747 358 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 GLULP15104 373 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 POLR2CP19387 275 aaPredicted RBP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 RPS3P23396 243 aaKnown RBP eCLIP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 KIR2DL3P43628 341 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ST3GAL1Q11201 340 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ADAM15Q13444 863 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 AUHQ13825 339 aaKnown RBP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 PTGR1Q14914 329 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 KHDC1LQ5JSQ8 128 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 FAM209BQ5JX69 171 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 LY6G5CQ5SRR4 150 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 LDLRAD1Q5T700 205 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF470Q6ECI4 717 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 PPP1R3BQ86XI6 285 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 GCDHQ92947 438 aaPredicted RBP8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ELMO3Q96BJ8 720 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 PPCDCQ96CD2 204 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF649Q9BS31 505 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 SUV39H2Q9H5I1 410 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 VAPAQ9P0L0 249 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 RNF24Q9Y225 148 aa8.34□□□□□ -1.07
SYNE1-206ENST00000367253 PLSCR5A0PG75 271 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms