RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 UTS2RQ9UKP6 389 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 FBXW2Q9UKT8 454 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 COL11A1P12107 1806 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 LOC285095A0A1B0GVY8 99 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 LCN1P31025 176 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 AVPR1BP47901 424 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 DUS2Q9NX74 493 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 FAM170BA6NMN3 283 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 STK25O00506 426 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 VILLO15195 856 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 COQ9O75208 318 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 IQCF3P0C7M6 154 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 MAGEA2P43356 314 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF140P52738 457 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 NHSL2Q5HYW2 709 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 SLC22A10Q63ZE4 541 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 OLFML2AQ68BL7 652 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR13F1Q8NGS4 319 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 PDLIM5Q96HC4 596 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZSWIM3Q96MP5 696 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 RIOK2Q9BVS4 552 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 CD93Q9NPY3 652 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 PCDHB14Q9Y5E9 798 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 CLDN24A6NM45 220 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 BMP8BP34820 402 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 LRRN1Q6UXK5 716 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 BMP8AQ7Z5Y6 402 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 PLCZ1Q86YW0 608 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 METTL25Q8N6Q8 603 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 SETD7Q8WTS6 366 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 DNAJA4Q8WW22 397 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 BTNL2Q9UIR0 455 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 PTGDR2Q9Y5Y4 395 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 HSDL2Q6YN16 418 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 GPRIN1Q7Z2K8 1008 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 HS3ST5Q8IZT8 346 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF527Q8NB42 609 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR2T33Q8NG76 320 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 S100A16Q96FQ6 103 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 EIF3KQ9UBQ5 218 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 INMT-MINDY4F8WBC2 141 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 PSMD8P48556 350 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 PPP2R2BQ00005 443 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 PPP1R8Q12972 351 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 TMEM35AQ53FP2 167 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF563Q8TA94 476 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 BRI3BPQ8WY22 251 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 PTERQ96BW5 349 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 FEVQ99581 238 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 C8AP07357 584 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 GGT2P36268 569 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 PUDPQ08623 228 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 SLC13A2Q13183 592 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 TMEM102Q8N9M5 508 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR10H5Q8NGA6 315 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 RPL10LQ96L21 214 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 SCGB3A2Q96PL1 93 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 CD84Q9UIB8 345 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 LDB2O43679 373 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 PRMT2P55345 433 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 HTR3EA5X5Y0 456 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 ERVPABLB-1P60509 514 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 RAPSNQ13702 412 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF691Q5VV52 312 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 TCEANCQ8N8B7 351 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 CD200R1Q8TD46 325 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 CSNK1G1Q9HCP0 422 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 ACOT13Q9NPJ3 140 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 OLAHQ9NV23 265 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 LYARQ9NX58 379 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 NPAP1Q9NZP6 1156 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 AGAP5A6NIR3 686 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 LRRTM2O43300 516 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF821O75541 412 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 GNAO1P09471 354 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 CRISP1P54107 249 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 EXOC3L2Q2M3D2 409 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 KIAA1161Q6NSJ0 714 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 KLHL24Q6TFL4 600 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 ATCAYQ86WG3 371 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZMIZ2Q8NF64 920 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 TOR1AIP2Q8NFQ8 470 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 SH3YL1Q96HL8 342 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 SLC30A3Q99726 388 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 KRBA1A5PL33 1030 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 MID1O15344 667 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 RPS13P62277 151 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 PRKCDQ05655 676 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 RAB6CQ53S08 254 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 CPZQ66K79 652 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 PLAG1Q6DJT9 500 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 RAB6CQ9H0N0 254 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 STOX2Q9P2F5 926 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 PROM1O43490 865 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 FHP07954 510 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 ALDH3B2P48448 385 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 APOFQ13790 326 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 GNPDA2Q8TDQ7 276 aa11.35□□□□□ -0.59
CDC42BPA-202ENST00000366764 TCEAL5Q5H9L2 206 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 LIPKQ5VXJ0 399 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms