RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 NOMO2Q5JPE7 1267 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 HECTD3Q5T447 861 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 ZNF57Q68EA5 555 aaPredicted RBP11.14□□□□□ -0.63
CNOT4-203ENST00000361528 FRMPD2BQ6IN97 320 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 NAPEPLDQ6IQ20 393 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 CNIH2Q6PI25 160 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 ABI3BPQ7Z7G0 1075 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 SLC43A2Q8N370 569 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 DNAJC5GQ8N7S2 189 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 MCPH1Q8NEM0 835 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 B3GNT7Q8NFL0 401 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 ZDHHC1Q8WTX9 485 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 CHURC1Q8WUH1 139 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 EXOSC8Q96B26 276 aaKnown RBP11.14□□□□□ -0.63
CNOT4-203ENST00000361528 FCRL1Q96LA6 429 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 MSTO1Q9BUK6 570 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 SARGQ9BW04 601 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 TDRD3Q9H7E2 651 aaKnown RBP11.14□□□□□ -0.63
CNOT4-203ENST00000361528 ARNT2Q9HBZ2 717 aa11.14□□□□□ -0.63
CNOT4-203ENST00000361528 TRBV23-1A0A0A0MS06 115 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 M0QYV0 167 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 DDX39AO00148 427 aaKnown RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 MPZL2O60487 215 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 CRCPO75575 148 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 GADD45GO95257 159 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 CD63P08962 238 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 SPP1P10451 314 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ENGP17813 658 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 PAMP19021 973 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 CXCL3P19876 107 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 CD79BP40259 229 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 EVX1P49640 407 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 FOXA1P55317 472 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 MAZP56270 477 aaKnown RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 AP1S1P61966 158 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ECH1Q13011 328 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 CHAF1BQ13112 559 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 IL18Q14116 193 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 NR6A1Q15406 480 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 KLHL26Q53HC5 615 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 DHRS7BQ6IAN0 325 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ANGPTL8Q6UXH0 198 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ZNF730Q6ZMV8 503 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 WDSUB1Q8N9V3 476 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 OR1S1Q8NH92 325 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 TRIM43Q96BQ3 446 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 EPYCQ99645 322 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 CRB3Q9BUF7 120 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 TMPRSS13Q9BYE2 586 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 REEP1Q9H902 201 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 TREM2Q9NZC2 230 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 HCN2Q9UL51 889 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 PCDHGA2Q9Y5H1 932 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 LY75O60449 1722 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 SLC31A2O15432 143 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 MFSD11O43934 449 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 AP2A2O94973 939 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 SIX3O95343 332 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 VIPP01282 170 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 FABP3P05413 133 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 UGT2B7P16662 529 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 SLC1A2P43004 574 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 KCNJ3P48549 501 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ACTR1AP61163 376 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 TSPAN5P62079 268 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 RPS8P62241 208 aaKnown RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ACY1Q03154 408 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 PTPN11Q06124 597 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ZNF155Q12901 538 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 CTBP1Q13363 440 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 PTPRRQ15256 657 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 SURF1Q15526 300 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 SSX2Q16385 188 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ZNF699Q32M78 642 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 CDNFQ49AH0 187 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 FAM171A1Q5VUB5 890 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 RNLSQ5VYX0 342 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 SLC51AQ86UW1 340 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 CALHM3Q86XJ0 350 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 GMCL1P1Q8NEA9 526 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 TRPV1Q8NER1 839 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 OR2T35Q8NGX2 323 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 COQ8AQ8NI60 647 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 FATE1Q969F0 183 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 PAWRQ96IZ0 340 aaKnown RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ZNF599Q96NL3 588 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 SAP130Q9H0E3 1048 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 LMAN2LQ9H0V9 348 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 DPAGT1Q9H3H5 408 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 OPA3Q9H6K4 179 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 GBA2Q9HCG7 927 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 AMBNQ9NP70 447 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 LATS2Q9NRM7 1088 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 C1orf109Q9NX04 203 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 VAPAQ9P0L0 249 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 TRPS1Q9UHF7 1281 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 LSM2Q9Y333 95 aaKnown RBP11.13□□□□□ -0.63
CNOT4-203ENST00000361528 ZNF451Q9Y4E5 1061 aa11.13□□□□□ -0.63
CNOT4-203ENST00000361528 SHANK3Q9BYB0 1731 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms