RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 RIF1Q5UIP0 2472 aaKnown RBP20.75■□□□□ 0.91
HOXA4-201ENST00000360046 A0A1W2PP18 115 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 BBIP1A8MTZ0 92 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 FBP2O00757 339 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 RFPL3O75679 317 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 IL6P05231 212 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 NUDT2P50583 147 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 MC1RQ01726 317 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 NDUFA9Q16795 377 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 UGT8Q16880 541 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 REP15Q6BDI9 236 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 FAM71E1Q6IPT2 247 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 ANKRD26P1Q6NSI1 321 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 RINLQ6ZS11 566 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 PRSS41Q7RTY9 318 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 TTC29Q8NA56 475 aaPredicted RBP20.75■□□□□ 0.91
HOXA4-201ENST00000360046 FBXO27Q8NI29 283 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 TSPEARQ8WU66 669 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 TM4SF18Q96CE8 201 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 SERINC2Q96SA4 455 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 REEP4Q9H6H4 257 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 EFCAB1Q9HAE3 211 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 ANKHQ9HCJ1 492 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 MIEF1Q9NQG6 463 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 FBXW2Q9UKT8 454 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 NAALAD2Q9Y3Q0 740 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 DYTNA2CJ06 578 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 HYKKA2RU49 373 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 ZNF860A6NHJ4 632 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 CFLARO15519 480 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 B3GALT2O43825 422 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 SCELO95171 688 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 PGRP06401 933 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 S100A3P33764 101 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 GSTM5P46439 218 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 ALDH9A1P49189 494 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 HNRNPH2P55795 449 aaKnown RBP20.74■□□□□ 0.91
HOXA4-201ENST00000360046 C21orf58P58505 322 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 TRA2BP62995 288 aaKnown RBP20.74■□□□□ 0.91
HOXA4-201ENST00000360046 KLC1Q07866 573 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 GRM7Q14831 915 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 DPY19L1Q2PZI1 675 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 B3GNT8Q7Z7M8 397 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 GPR135Q8IZ08 494 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 EFCAB3Q8N7B9 438 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 OR1L3Q8NH93 324 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 SLC7A6OSQ96CW6 309 aaPredicted RBP20.74■□□□□ 0.91
HOXA4-201ENST00000360046 PRPF18Q99633 342 aaKnown RBP20.74■□□□□ 0.91
HOXA4-201ENST00000360046 SLC52A3Q9NQ40 469 aa20.74■□□□□ 0.91
HOXA4-201ENST00000360046 TEX10Q9NXF1 929 aaPredicted RBP20.74■□□□□ 0.91
HOXA4-201ENST00000360046 WBP11Q9Y2W2 641 aaKnown RBP20.74■□□□□ 0.91
HOXA4-201ENST00000360046 MRASO14807 208 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 GUCY1B2O75343 617 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 MSL3P1P0C860 447 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 RPL3P39023 403 aaKnown RBP20.73■□□□□ 0.91
HOXA4-201ENST00000360046 LIMK1P53667 647 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 ITGA1P56199 1179 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 E2F1Q01094 437 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 ART3Q13508 389 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 HEPACAMQ14CZ8 416 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 CPTPQ5TA50 214 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 R3HCC1LQ7Z5L2 792 aaKnown RBP20.73■□□□□ 0.91
HOXA4-201ENST00000360046 PDSS2Q86YH6 399 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 MMP21Q8N119 569 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 ARHGEF39Q8N4T4 335 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 C10orf90Q96M02 699 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 OR52E6Q96RD3 313 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 LYARQ9NX58 379 aaKnown RBP20.73■□□□□ 0.91
HOXA4-201ENST00000360046 SERTAD3Q9UJW9 196 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 EXO1Q9UQ84 846 aaKnown RBP20.73■□□□□ 0.91
HOXA4-201ENST00000360046 GABRR3A8MPY1 467 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 GALR3O60755 368 aaPredicted RBP20.73■□□□□ 0.91
HOXA4-201ENST00000360046 FURINP09958 794 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 PTPN4P29074 926 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 KIR3DL1P43629 444 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 OLR1P78380 273 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 ACY1Q03154 408 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 SRSF11Q05519 484 aaKnown RBP20.73■□□□□ 0.91
HOXA4-201ENST00000360046 FOXM1Q08050 763 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 ILKQ13418 452 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 GPR180Q86V85 440 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 RETREG3Q86VR2 466 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 RBM15BQ8NDT2 890 aaKnown RBP20.73■□□□□ 0.91
HOXA4-201ENST00000360046 PPCDCQ96CD2 204 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 ZNF501Q96CX3 271 aaPredicted RBP20.73■□□□□ 0.91
HOXA4-201ENST00000360046 FAIM2Q9BWQ8 316 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 SH3BP4Q9P0V3 963 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 LEF1Q9UJU2 399 aaPredicted RBP20.73■□□□□ 0.91
HOXA4-201ENST00000360046 ASB4Q9Y574 426 aa20.73■□□□□ 0.91
HOXA4-201ENST00000360046 CROCCQ5TZA2 2017 aa20.72■□□□□ 0.91
HOXA4-201ENST00000360046 FITM1A5D6W6 292 aa20.72■□□□□ 0.91
HOXA4-201ENST00000360046 ASPDHA6ND91 283 aa20.72■□□□□ 0.91
HOXA4-201ENST00000360046 ANKRD65E5RJM6 399 aa20.72■□□□□ 0.91
HOXA4-201ENST00000360046 GYG2O15488 501 aa20.72■□□□□ 0.91
HOXA4-201ENST00000360046 GFRA3O60609 400 aa20.72■□□□□ 0.91
HOXA4-201ENST00000360046 PIM1P11309 404 aaPredicted RBP20.72■□□□□ 0.91
HOXA4-201ENST00000360046 CSTF2P33240 577 aaKnown RBP eCLIP20.72■□□□□ 0.91
HOXA4-201ENST00000360046 TRA2AQ13595 282 aaKnown RBP eCLIP20.72■□□□□ 0.91
HOXA4-201ENST00000360046 MUM1Q2TAK8 710 aa20.72■□□□□ 0.91
HOXA4-201ENST00000360046 NDUFAF5Q5TEU4 345 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms