RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 NMD3Q96D46 503 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 MSLNLQ96KJ4 702 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 NRTNQ99748 197 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 AMBRA1Q9C0C7 1298 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 TTYH1Q9H313 450 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 REEP1Q9H902 201 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 MRPS30Q9NP92 439 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 FZD3Q9NPG1 666 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 C1GALT1Q9NS00 363 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 GPATCH2Q9NW75 528 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 VNN3Q9NY84 501 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 PADI2Q9Y2J8 665 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 PLEKHM1Q9Y4G2 1056 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 U3KQV3 271 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 MYO1GB0I1T2 1018 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 PDPK1O15530 556 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 LATO43561 262 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 UGT2B11O75310 529 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 PRKACGP22612 351 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 IGFBP5P24593 272 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 NDUFS1P28331 727 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 SHMT2P34897 504 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 PPP2CBP62714 309 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 PPP2CAP67775 309 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 KCNJ10P78508 379 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 PRSS53Q2L4Q9 553 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 COX20Q5RI15 118 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 ZNF852Q6ZMS4 543 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 GPR141Q7Z602 305 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 GALNT10Q86SR1 603 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 ADGRF3Q8IZF5 1079 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 MAL2Q969L2 176 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 XKR8Q9H6D3 395 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 KIR3DX1Q9H7L2 352 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 DDX31Q9H8H2 851 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 TMEFF2Q9UIK5 374 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 ANGPT4Q9Y264 503 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 PIAS3Q9Y6X2 628 aa17.45■□□□□ 0.38
PDLIM7-203ENST00000359895 LOC100130705A0A1B0GUX0 176 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 RTCAO00442 366 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 PRICKLE3O43900 615 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 ARAFP10398 606 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 ARFIP1P53367 373 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 ROR2Q01974 943 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 PPP1R8Q12972 351 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 NFATC4Q14934 902 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 SLC5A12Q1EHB4 618 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 ZBED5Q49AG3 693 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 OR4C11Q6IEV9 310 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 Q7L0L9 218 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 TRIM69Q86WT6 500 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 RNF130Q86XS8 419 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 CREB3L4Q8TEY5 395 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 C7orf34Q96L11 122 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 EPYCQ99645 322 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 ZNF576Q9H609 170 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 EPS8L2Q9H6S3 715 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 FGF22Q9HCT0 170 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 NEUROD4Q9HD90 331 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 RSL24D1Q9UHA3 163 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 BLOC1S6Q9UL45 172 aa17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 SAMHD1Q9Y3Z3 626 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-203ENST00000359895 H3BSA7 217 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 GCM2O75603 506 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 APBB3O95704 486 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 C9P02748 559 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 DRD2P14416 443 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 ETS2P15036 469 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 CMPK1P30085 196 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 RYKP34925 604 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 AHRP35869 848 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 LTBRP36941 435 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 FRKP42685 505 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 CDK9P50750 372 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 CDK6Q00534 326 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 LSAMPQ13449 338 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 IFI44LQ53G44 452 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 EOGTQ5NDL2 527 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 KDM4DQ6B0I6 523 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 ZNF773Q6PK81 442 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 WASH2PQ6VEQ5 465 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 ZC3H7AQ8IWR0 971 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 SETD9Q8NE22 299 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 PIK3C3Q8NEB9 887 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 NFKBIDQ8NI38 313 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 WDR92Q96MX6 357 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 ZNF347Q96SE7 839 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 MYOCQ99972 504 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 LHX9Q9NQ69 397 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 PRDM8Q9NQV8 689 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 MAP4K5Q9Y4K4 846 aa17.43■□□□□ 0.38
PDLIM7-203ENST00000359895 IGKV1-8A0A0C4DH67 115 aa17.42■□□□□ 0.38
PDLIM7-203ENST00000359895 OR52A4PA6NMU1 304 aa17.42■□□□□ 0.38
PDLIM7-203ENST00000359895 LCMT2O60294 686 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-203ENST00000359895 ALDH9A1P49189 494 aa17.42■□□□□ 0.38
PDLIM7-203ENST00000359895 CRYBA2P53672 197 aa17.42■□□□□ 0.38
PDLIM7-203ENST00000359895 MANFP55145 182 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-203ENST00000359895 GABARAPL2P60520 117 aa17.42■□□□□ 0.38
PDLIM7-203ENST00000359895 DSTNP60981 165 aa17.42■□□□□ 0.38
PDLIM7-203ENST00000359895 EEF1A2Q05639 463 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms