RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SELPLGQ14242 412 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 CYBRD1Q53TN4 286 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 PRAMEF14Q5SWL7 426 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 PMS2CLQ68D20 193 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 GLYATQ6IB77 296 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 TMEM132CQ8N3T6 1108 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 RNF175Q8N4F7 328 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 OR5K2Q8NHB8 316 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 OSGEPL1Q9H4B0 414 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 SERHLQ9NQF3 203 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 TMEM74BQ9NUR3 256 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 SMPD3Q9NY59 655 aaPredicted RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 KLF15Q9UIH9 416 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 PPT2Q9UMR5 302 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 MAGED1Q9Y5V3 778 aaPredicted RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 A0A1W2PR77 199 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 TRIM64CA6NLI5 447 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 A8MU76 341 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 CNOT3O75175 753 aaKnown RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 GMNNO75496 209 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 ZBTB11O95625 1053 aaPredicted RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 HOXC4P09017 264 aaPredicted RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 SP9P0CG40 484 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 ZNF182P17025 639 aaPredicted RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 GGT1P19440 569 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 HRH2P25021 359 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 KCNJ8Q15842 424 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 LPAL2Q16609 132 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 PLK5Q496M5 336 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 ABRAXAS1Q6UWZ7 409 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 MSRB3Q8IXL7 192 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 PACRGLQ8N7B6 248 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 OR5AR1Q8NGP9 310 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 CCL4L1Q8NHW4 92 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 TBC1D15Q8TC07 691 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 DNASE2BQ8WZ79 361 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 SGCDQ92629 289 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 NSMCE2Q96MF7 247 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 THUMPD3Q9BV44 507 aaKnown RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 TMEM168Q9H0V1 697 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 TBC1D23Q9NUY8 699 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 SLC25A37Q9NYZ2 338 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 LRP4O75096 1905 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 SPTY2D1-AS1A0A0U1RR47 76 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 ANKRD34BA5PLL1 514 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 CAPGP40121 348 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 KIR3DL1P43629 444 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 SRP54P61011 504 aaKnown RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 FZD2Q14332 565 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 SLBPQ14493 270 aaKnown RBP eCLIP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 CYP2A13Q16696 494 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 PGS1Q32NB8 556 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 CATSPEREQ5SY80 951 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 LYSMD4Q5XG99 296 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 CEP68Q76N32 757 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 SPRED1Q7Z699 444 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 BPHLQ86WA6 291 aaPredicted RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 TBC1D21Q8IYX1 336 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 OR8J2Q8NGG1 315 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 EGLN2Q96KS0 407 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 RNF145Q96MT1 663 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 TIMM29Q9BSF4 260 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 GORASP2Q9H8Y8 452 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 GPR27Q9NS67 375 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 ANAPC2Q9UJX6 822 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 PCDHB14Q9Y5E9 798 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 ZNF318Q5VUA4 2279 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 RASGRP1O95267 797 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 HOXB9P17482 250 aaPredicted RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 MATN1P21941 496 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 NR4A1P22736 598 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 AK4P27144 223 aaPredicted RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 PIK3CBP42338 1070 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 EIF2B5Q13144 721 aaKnown RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 WDR45BQ5MNZ6 344 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 TMTC4Q5T4D3 741 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 PRAMEF13Q5VWM6 474 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 GALNT18Q6P9A2 607 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 ZC3H7AQ8IWR0 971 aaKnown RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 OR2T12Q8NG77 320 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 OR52E4Q8NGH9 312 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 TANKQ92844 425 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 POP5Q969H6 163 aaKnown RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 PLEKHA8Q96JA3 519 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 OR2M4Q96R27 311 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 PCBD2Q9H0N5 130 aa13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 TRIT1Q9H3H1 467 aaKnown RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 FAM120CQ9NX05 1096 aaKnown RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 IFT80Q9P2H3 777 aaPredicted RBP13.25□□□□□ -0.29
CSNK1E-201ENST00000359867 PIPSLA2A3N6 862 aa13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 BCAT2O15382 392 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 ANXA6P08133 673 aa13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 SLC35G4P0C7Q5 338 aa13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 RPS13P62277 151 aaKnown RBP13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 TSTA3Q13630 321 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 NELL1Q92832 810 aa13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 SCARF2Q96GP6 870 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 EBPLQ9BY08 206 aa13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 FANCEQ9HB96 536 aa13.24□□□□□ -0.29
CSNK1E-201ENST00000359867 C8orf4Q9NR00 106 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms