RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 AP1M2Q9Y6Q5 423 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 ATRNL1Q5VV63 1379 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 H2AFB2P0C5Z0 115 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 UNGP13051 313 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-203ENST00000359759 AKR1C4P17516 323 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 CYP1B1Q16678 543 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 GPR139Q6DWJ6 353 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF550Q7Z398 422 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 ASCC1Q8N9N2 400 aaKnown RBP15.49■□□□□ 0.07
COL18A1-203ENST00000359759 CAMKVQ8NCB2 501 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 OR4K1Q8NGD4 311 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 MMP20O60882 483 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 NPAS3Q8IXF0 933 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 WDR20Q8TBZ3 569 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 NIFKQ9BYG3 293 aaKnown RBP15.49■□□□□ 0.07
COL18A1-203ENST00000359759 BTBD1Q9H0C5 482 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 PCDHGA8Q9Y5G5 932 aa15.49■□□□□ 0.07
COL18A1-203ENST00000359759 LATS1O95835 1130 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 ACRP10323 421 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 GAS6Q14393 721 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 SNIP1Q8TAD8 396 aaKnown RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 SLC22A18Q96BI1 424 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 RDH12Q96NR8 316 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 PHB2Q99623 299 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 MAFBQ9Y5Q3 323 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 PPRC1Q5VV67 1664 aaKnown RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 ABCA9Q8IUA7 1624 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 OR6C74A6NCV1 312 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 HTRA2O43464 458 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 CDC123O75794 336 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 SNAP29O95721 258 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 CFL1P23528 166 aaKnown RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 KCNC4Q03721 635 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 ST3GAL4Q11206 333 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 CEACAM19Q7Z692 300 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 Q8N402 240 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 RAD9AQ99638 391 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 GKN3PP0CG01 181 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 ACVR1BP36896 505 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 BLKP51451 505 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 INHBEP58166 350 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 TAS2R43P59537 309 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 TXNDC8Q6A555 127 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 FOXR2Q6PJQ5 311 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 Q6ZVU0 165 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 HAPLN3Q96S86 360 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 P2RY13Q9BPV8 354 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 PPIL3Q9H2H8 161 aaKnown RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 SARDHQ9UL12 918 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 KCNK6Q9Y257 313 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 FAM159BA6NKW6 160 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 DCKP27707 260 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 MFSD13AQ14CX5 517 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 PON2Q15165 354 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 DRICH1Q6PGQ1 229 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 COMMD7Q86VX2 200 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 TICAM1Q8IUC6 712 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 BOLLQ8N9W6 283 aaKnown RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 MUS81Q96NY9 551 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 GLS2Q9UI32 602 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 PDYNP01213 254 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 IFNA5P01569 189 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 SMPD1P17405 629 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 CELP19835 753 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 SLC10A6Q3KNW5 377 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 MSS51Q4VC12 460 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF648Q5T619 568 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-203ENST00000359759 RGMBQ6NW40 437 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 LRRTM4Q86VH4 590 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 FETUBQ9UGM5 382 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 VWDEQ8N2E2 1590 aa15.48■□□□□ 0.07
COL18A1-203ENST00000359759 EEF1E1-BLOC1S5C9J1V9 151 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 LEPRP48357 1165 aaKnown RBP15.47■□□□□ 0.07
COL18A1-203ENST00000359759 GPX6P59796 221 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 DCDC5Q6ZRR9 648 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 CLEC20AQ6ZU45 233 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 FAM86B1Q8N7N1 296 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 C1orf21Q9H246 121 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 ZDHHC4Q9NPG8 344 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 COL20A1Q9P218 1284 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 A0A1W2PQ45 241 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-203ENST00000359759 A0A1W2PQY0 241 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 C9J4A7 227 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 ERP29P30040 261 aaKnown RBP15.47■□□□□ 0.07
COL18A1-203ENST00000359759 CTHP32929 405 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 ARL14Q8N4G2 192 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 KREMEN2Q8NCW0 462 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 EFCAB11Q9BUY7 163 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 ARL6Q9H0F7 186 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 FN3KQ9H479 309 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 DLDP09622 509 aaKnown RBP15.47■□□□□ 0.07
COL18A1-203ENST00000359759 RFTN1Q14699 578 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-203ENST00000359759 PCLAFQ15004 111 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 TTLL10Q6ZVT0 673 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 JPH3Q8WXH2 748 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-203ENST00000359759 SCRN2Q96FV2 425 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 SYT4Q9H2B2 425 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 SIX2Q9NPC8 291 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 FBP2O00757 339 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 RFPL1O75677 317 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms