RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CCL27Q9Y4X3 112 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 PRRT4C9JH25 899 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 SLC22A1O15245 554 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 GREM1O60565 184 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 CA3P07451 260 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 ACPPP15309 386 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 GSTM5P46439 218 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 ZFP36L2P47974 494 aaKnown RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 DEFA1P59665 94 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 DEFA3P59666 94 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 MADCAM1Q13477 382 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 VEZF1Q14119 521 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 LASP1Q14847 261 aaKnown RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 ZNF77Q15935 545 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 TJAP1Q5JTD0 557 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 COX20Q5RI15 118 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 ZNF691Q5VV52 312 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 BHLHB9Q6PI77 547 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 UTS2BQ765I0 119 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 OR52N2Q8NGI0 321 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 LCN9Q8WX39 176 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 S100ZQ8WXG8 99 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 TEFMQ96QE5 360 aaKnown RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 OR4K3Q96R72 315 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 KXD1Q9BQD3 176 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 RBM38Q9H0Z9 239 aaKnown RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 DCSTAMPQ9H295 470 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 TOR4AQ9NXH8 423 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 TVP23BQ9NYZ1 205 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 ST14Q9Y5Y6 855 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 CAPN5O15484 640 aaPredicted RBP10.71□□□□□ -0.7
SSU72-202ENST00000359060 VEGFDO43915 354 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 CYP7B1O75881 506 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 CD22P20273 847 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 ITGB7P26010 798 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 FEN1P39748 380 aaKnown RBP10.71□□□□□ -0.7
SSU72-202ENST00000359060 BMXP51813 675 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 EMX1Q04741 257 aaPredicted RBP10.71□□□□□ -0.7
SSU72-202ENST00000359060 GAB1Q13480 694 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 SLC9A5Q14940 896 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 CLCA4Q14CN2 919 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 CDKN3Q16667 212 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 RPS26P11Q5JNZ5 115 aaPredicted RBP10.71□□□□□ -0.7
SSU72-202ENST00000359060 ZNF852Q6ZMS4 543 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 ZNF554Q86TJ5 538 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 C10orf111Q8N326 155 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 SLC15A4Q8N697 577 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 KBTBD8Q8NFY9 601 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 IPCEF1Q8WWN9 437 aaPredicted RBP10.71□□□□□ -0.7
SSU72-202ENST00000359060 SLC9A6Q92581 669 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 HTRA1Q92743 480 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 SLC6A16Q9GZN6 736 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 PCBD2Q9H0N5 130 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 EHD1Q9H4M9 534 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 FZD3Q9NPG1 666 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 SERHLQ9NQF3 203 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 BTNL2Q9UIR0 455 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 NCKAP1Q9Y2A7 1128 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 HCN4Q9Y3Q4 1203 aa10.71□□□□□ -0.7
SSU72-202ENST00000359060 KMOO15229 486 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 NDUFS4O43181 175 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 GPR37L1O60883 481 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 NPPBP16860 134 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 MYL12AP19105 171 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 EIF2B2P49770 351 aaKnown RBP10.7□□□□□ -0.7
SSU72-202ENST00000359060 SMIM11AP58511 58 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 DCDC1P59894 354 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 ERVK-21P61565 698 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 SELENOWP63302 87 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 CTU2Q2VPK5 515 aaKnown RBP10.7□□□□□ -0.7
SSU72-202ENST00000359060 ANKDD1AQ495B1 522 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 TSPYL5Q86VY4 417 aaPredicted RBP10.7□□□□□ -0.7
SSU72-202ENST00000359060 FLCNQ8NFG4 579 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 FGF13Q92913 245 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 CUEDC1Q9NWM3 386 aaPredicted RBP10.7□□□□□ -0.7
SSU72-202ENST00000359060 KLHL3Q9UH77 587 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 ZNF780BQ9Y6R6 833 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 PATJQ8NI35 1801 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 SLC5A10A0PJK1 596 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 EFCAB10A6NFE3 127 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 DLGAP1O14490 977 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 STSP08842 583 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 GPX2P18283 190 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 TAS2R41P59536 307 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 FADDQ13158 208 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 NCF4Q15080 339 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 TIMM50Q3ZCQ8 353 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 ARMCX6Q7L4S7 300 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 C12orf40Q86WS4 652 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 VN1R2Q8NFZ6 395 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 CCDC3Q9BQI4 270 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 SPATA5L1Q9BVQ7 753 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 VNN3Q9NY84 501 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 PAIP2BQ9ULR5 123 aaKnown RBP10.7□□□□□ -0.7
SSU72-202ENST00000359060 LYVE1Q9Y5Y7 322 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 RPS3AP61247 264 aaKnown RBP10.7□□□□□ -0.7
SSU72-202ENST00000359060 RPS7P62081 194 aaKnown RBP10.7□□□□□ -0.7
SSU72-202ENST00000359060 UBE3AQ05086 875 aa10.7□□□□□ -0.7
SSU72-202ENST00000359060 EIF4HQ15056 248 aaKnown RBP10.7□□□□□ -0.7
SSU72-202ENST00000359060 DEPDC1Q5TB30 811 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms