RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ALDH3B1P43353 468 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 HK3P52790 923 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CRISP3P54108 245 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MAD2L1BPQ15013 274 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TRAM1Q15629 374 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SLC51BQ86UW2 128 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SDR16C5Q8N3Y7 309 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 LRRC46Q96FV0 321 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM27Q9HBJ8 222 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 FAM170BA6NMN3 283 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 HLA-DQB2P05538 268 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 BMP1P13497 986 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 BATFQ16520 125 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ZFAND4Q86XD8 727 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 AIF1LQ9BQI0 150 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 STRA6Q9BX79 667 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 C11orf54Q9H0W9 315 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 LYARQ9NX58 379 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 HSFX1Q9UBD0 423 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ARPC1BO15143 372 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MAOAP21397 527 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ADH6P28332 368 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 GPR85P60893 370 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 OLIG2Q13516 323 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 LRRC26Q2I0M4 334 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 XKR4Q5GH76 650 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ERCC6L2Q5T890 1561 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 KDM1BQ8NB78 822 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 GALNT9Q9HCQ5 603 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 NEDD8-MDP1E9PL57 170 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 VAMP1P23763 118 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CXCR3P49682 368 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 RGS8P57771 180 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 USP41Q3LFD5 358 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ENTHD1Q8IYW4 607 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 NDRG1Q92597 394 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 OSTF1Q92882 214 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 NSUN5Q96P11 429 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 FCRL3Q96P31 734 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 PHB2Q99623 299 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 FZD4Q9ULV1 537 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CACNG3O60359 315 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SPDEFO95238 335 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF286BP0CG31 522 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MECP2P51608 486 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 P2RX3P56373 397 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SPANXN4Q5MJ08 99 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 REEP3Q6NUK4 255 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CERS6Q6ZMG9 384 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ADGRG2Q8IZP9 1017 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 FBXO8Q9NRD0 319 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 FAM120CQ9NX05 1096 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ACSL6Q9UKU0 697 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 UNC119BA6NIH7 251 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 C4BPAP04003 597 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 GIMD1P0DJR0 217 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 GIFP27352 417 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 VAMP2P63027 116 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CREMQ03060 361 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 KCNC4Q03721 635 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 TDGQ13569 410 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SERPINA13PQ6UXR4 307 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 OR2L3Q8NG85 312 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 KIAA1191Q96A73 305 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 MTERF1Q99551 399 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 NIT2Q9NQR4 276 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 UFSP2Q9NUQ7 469 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 MOCS1Q9NZB8 636 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 A0A1B0GVM2 712 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 F5H5P2 479 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 J3QLW9 94 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 XKRYO14609 159 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 NUDT14O95848 222 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 TSPAN15O95858 294 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ALDH1A1P00352 501 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 HOXC6P09630 235 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 BCKDHAP12694 445 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF19P17023 458 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CBX5P45973 191 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 HSPA7P48741 367 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CRISP1P54107 249 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 TLE2Q04725 743 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF529Q6P280 563 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CEACAM19Q7Z692 300 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CMASQ8NFW8 434 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 FKBP10Q96AY3 582 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 FYTTD1Q96QD9 318 aaKnown RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 COMMD4Q9H0A8 199 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 OR51I1Q9H343 314 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ASB8Q9H765 288 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 BRD9Q9H8M2 597 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 IGSF5Q9NSI5 407 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 A0A1W2PRQ8 180 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 C17orf102A2RUQ5 167 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ELOA3DA6NLF2 546 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-203ENST00000358544 IFNA2P01563 188 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CAPNS1P04632 268 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CD1DP15813 335 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SCNN1AP37088 669 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ERVFC1P60507 584 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms